Detailed information NTG0656561

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MIH19_RS04160
• Genome accession: NZ_CP092289
• Coordinates: 872336..873730 (-)
• Length: 464 a.a.
• NCBI ID: WP_249007684.1
• Uniprot ID: -
• Organism: Marinobacter sp. M1C
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 867336..878730

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MIH19_RS04145 (MIH19_04145)	-	867517..871257 (+)	3741	WP_249007683.1	PilC/PilY family type IV pilus protein	-
MIH19_RS04155 (MIH19_04155)	-	871259..871690 (+)	432	WP_283164091.1	type IV pilin protein	-
MIH19_RS04160 (MIH19_04160)	pilR	872336..873730 (-)	1395	WP_249007684.1	sigma-54 dependent transcriptional regulator	Regulator
MIH19_RS04165 (MIH19_04165)	-	873739..875436 (-)	1698	WP_249007685.1	ATP-binding protein	-
MIH19_RS04170 (MIH19_04170)	-	875573..877237 (+)	1665	WP_249007686.1	NAD+ synthase	-
MIH19_RS04175 (MIH19_04175)	-	877277..878491 (-)	1215	WP_249013660.1	transposase	-
MIH19_RS04180 (MIH19_04180)	-	878512..878598 (+)	87	Protein_821	IS200/IS605 family transposase	-

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 50529.82 Da
• Isoelectric Point: 5.1253

>NTDB_id=656561 MIH19_RS04160 WP_249007684.1 872336..873730(-) (pilR) [Marinobacter sp. M1C]
MTKLTALIVDDEPDIRDLLEITLSRMGLNTVTAGTLAGGIAGMQKHTPNLCLTDMNLPDGKGIELVQWIQQHSPNTPVAV
ITAYGSMDIAIESLKAGAFDFVSKPVELPRLRELVNTALKLAQSPEPGPEDNNDPGLLLGNSAQIQTLRNQARKLARSQA
PVFIQGESGSGKELVARTIHQQGPRCDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVDNKPGLFQSANGGTLFLDEIA
DLPLPMQVKLLRAIQEKAVRPVGDSHEVPVDIRVLSATHKDLPGLVQDGLFRQDLFYRINVIEIRVPPLRERSGDIALLA
RHILLRIAREYECTPIALTDAAVDYLKGYHFPGNVRELENILERAFTLCDGDVIDTGDLQLGSSYSYDNNTDPSLLAPTA
SVVATADIELSEQGLGLEGYLESIERKAIEQALEATRWNKTAAAKKLGISFRALRYKLKKLGLE

Nucleotide

• Length: 1395 bp

>NTDB_id=656561 MIH19_RS04160 WP_249007684.1 872336..873730(-) (pilR) [Marinobacter sp. M1C]
ATGACCAAACTGACCGCGCTGATCGTAGACGACGAACCCGACATCCGTGACCTACTAGAGATAACCCTCAGCCGCATGGG
CCTGAATACGGTCACCGCGGGCACTCTGGCAGGGGGGATCGCAGGCATGCAAAAGCACACGCCAAATTTGTGCCTGACCG
ACATGAACCTGCCAGATGGCAAAGGCATCGAGCTGGTGCAATGGATTCAACAGCATTCCCCCAATACGCCGGTCGCCGTT
ATAACAGCCTACGGCAGTATGGACATCGCCATTGAGTCCCTGAAGGCAGGTGCCTTTGATTTTGTGTCAAAGCCCGTCGA
ATTGCCGCGGCTGCGGGAGCTGGTCAACACTGCCCTGAAACTTGCCCAAAGCCCGGAGCCTGGGCCAGAAGACAATAACG
ACCCGGGCTTGCTGCTGGGCAATTCCGCCCAAATTCAAACCTTACGCAATCAGGCCCGCAAACTGGCTCGCAGCCAAGCG
CCGGTCTTTATTCAAGGCGAATCCGGCAGCGGTAAAGAGCTGGTCGCGCGCACCATTCATCAGCAGGGCCCTAGATGTGA
TGGGCCGTTCATAGCCGTGAACTGTGGCGCTATTCCGTCTGAGTTAATGGAAAGTGAGTTTTTCGGCCACAAAAAAGGCA
GCTTCACCGGAGCGGTGGACAACAAGCCAGGCCTGTTTCAAAGCGCCAACGGCGGCACGCTTTTTCTGGATGAAATCGCC
GACTTACCACTGCCCATGCAAGTAAAGCTGCTGCGCGCCATTCAGGAAAAAGCCGTACGCCCTGTCGGTGACAGCCACGA
AGTGCCGGTCGATATCCGTGTGCTTAGTGCAACCCATAAAGATCTTCCGGGGCTGGTACAAGATGGCCTTTTCCGCCAGG
ACCTGTTCTATCGCATCAACGTGATTGAAATCCGCGTGCCGCCTCTGCGCGAACGCAGCGGTGATATAGCGCTGCTTGCC
AGACACATATTGCTGCGCATCGCCCGCGAATACGAGTGCACACCCATCGCCCTTACCGATGCCGCCGTCGACTATTTAAA
GGGCTACCATTTCCCGGGTAATGTGCGCGAGCTGGAAAACATTCTGGAGCGGGCGTTTACACTTTGCGACGGAGACGTTA
TTGACACCGGCGACCTTCAGCTTGGCAGTTCCTACAGCTATGACAACAACACTGATCCGTCTTTGCTGGCACCCACAGCT
TCGGTAGTGGCAACGGCAGATATTGAACTGTCGGAGCAGGGCCTGGGCCTTGAGGGGTATCTGGAGAGCATAGAGCGCAA
GGCTATTGAACAGGCGCTGGAAGCCACGCGTTGGAATAAAACGGCGGCGGCGAAAAAGCTGGGGATCAGTTTTCGGGCGT
TGCGGTATAAGTTGAAGAAGTTGGGATTGGAGTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (421-461)

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.366	100	0.625
pilR	Acinetobacter baumannii strain A118	53.057	98.707	0.524