Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG786_RS13230 Genome accession   NZ_CP108217
Coordinates   3155323..3156447 (+) Length   374 a.a.
NCBI ID   WP_275492805.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00101     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3150323..3161447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG786_RS13215 (OG786_13250) - 3150372..3152468 (-) 2097 WP_405458010.1 BACON domain-containing protein -
  OG786_RS13220 (OG786_13255) - 3152859..3153722 (-) 864 WP_327268721.1 class I SAM-dependent methyltransferase -
  OG786_RS13225 (OG786_13260) radA/sms 3153830..3155242 (+) 1413 WP_275492804.1 DNA repair protein RadA Machinery gene
  OG786_RS13230 (OG786_13265) disA 3155323..3156447 (+) 1125 WP_275492805.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG786_RS13235 (OG786_13270) - 3156561..3157397 (-) 837 WP_405458013.1 hypothetical protein -
  OG786_RS13240 (OG786_13275) - 3157641..3158546 (+) 906 WP_275492807.1 A/G-specific adenine glycosylase -
  OG786_RS13245 (OG786_13280) - 3158670..3159374 (-) 705 WP_275492808.1 M23 family metallopeptidase -
  OG786_RS13250 (OG786_13285) - 3159851..3160210 (+) 360 WP_327268723.1 trypco2 family protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40269.16 Da        Isoelectric Point: 5.0196

>NTDB_id=656523 OG786_RS13230 WP_275492805.1 3155323..3156447(+) (disA) [Streptomyces sp. NBC_00101]
MAANDRASSPGKSGQGTGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVMNVEFAATRLR
ELCKLDGALILDKDITKILRAGVQLVPDAAIPTEETGTRHRTADRVSKSCGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTPKRSRTVAEALTELDALSHSELLELAVVARSLGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IMERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=656523 OG786_RS13230 WP_275492805.1 3155323..3156447(+) (disA) [Streptomyces sp. NBC_00101]
GTGGCAGCCAACGACCGGGCATCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAAGCGCTCATGCGCGCTTCGCT
GAGCGCGGTCGCGCCCGGAACGGCCCTGCGCGACGGACTGGAACGCATCCTGCGGGGGAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGTGGCTTCGTGATGAACGTCGAGTTCGCCGCGACGCGTCTGCGC
GAGCTCTGCAAGCTCGACGGGGCGCTCATCCTGGACAAGGACATCACCAAGATCCTCCGGGCGGGCGTGCAGCTCGTCCC
GGACGCCGCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGCGTCTCCAAGTCCTGTGGTTTCCCGG
TGGTCTCCGTCTCCCAGTCGATGCGTCTGATCGCGCTCTACGTCGACGGTGAGCGGCGGGTCCTGGAGGAGTCGTCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCCGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGTCTGCTGTCGCTCCAGTTGGACGAGCTGATCGCG
GGGGTGGAGCCGGAGCGCGAGCTGGTGGTCCGCGACTACGTCCCCGAGCCGACCCCGAAGCGGTCGCGCACGGTCGCGGA
GGCGCTGACCGAGCTGGACGCCCTGAGCCACTCCGAGCTGCTCGAACTCGCCGTGGTGGCACGCTCGCTGGGGTACAGCG
GTTCGCCCGAGACGCTGGACTCCGCGGTCTCGCCGCGGGGTTTCCGGCTGCTGGCGAAGGTCCCGAGGCTCCCCGGTGCG
ATCATGGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCGGCGAGTGTGGACGATCTCCAGGCCGTGGA
CGGCGTCGGGGAGGCGCGGGCGCGGAGCGTCCGGGAGGGCCTCTCCCGGCTGGCCGAGTCGTCGATCCTGGAACGGTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441