Detailed information NTG0656480

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: MIH16_RS04165
• Genome accession: NZ_CP092283
• Coordinates: 874017..875411 (-)
• Length: 464 a.a.
• NCBI ID: WP_249007684.1
• Uniprot ID: -
• Organism: Marinobacter sp. M4C
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 869017..880411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MIH16_RS04150 (MIH16_04150)	-	869198..872938 (+)	3741	WP_249007683.1	PilC/PilY family type IV pilus protein	-
MIH16_RS04160 (MIH16_04160)	-	872940..873371 (+)	432	WP_283164091.1	type IV pilin protein	-
MIH16_RS04165 (MIH16_04165)	pilR	874017..875411 (-)	1395	WP_249007684.1	sigma-54 dependent transcriptional regulator	Regulator
MIH16_RS04170 (MIH16_04170)	-	875420..877117 (-)	1698	WP_249007685.1	ATP-binding protein	-
MIH16_RS04175 (MIH16_04175)	-	877254..878918 (+)	1665	WP_249007686.1	NAD+ synthase	-
MIH16_RS04180 (MIH16_04180)	-	878958..880172 (-)	1215	WP_249013660.1	transposase	-
MIH16_RS04185 (MIH16_04185)	-	880193..880279 (+)	87	Protein_822	IS200/IS605 family transposase	-

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 50529.82 Da
• Isoelectric Point: 5.1253

>NTDB_id=656480 MIH16_RS04165 WP_249007684.1 874017..875411(-) (pilR) [Marinobacter sp. M4C]
MTKLTALIVDDEPDIRDLLEITLSRMGLNTVTAGTLAGGIAGMQKHTPNLCLTDMNLPDGKGIELVQWIQQHSPNTPVAV
ITAYGSMDIAIESLKAGAFDFVSKPVELPRLRELVNTALKLAQSPEPGPEDNNDPGLLLGNSAQIQTLRNQARKLARSQA
PVFIQGESGSGKELVARTIHQQGPRCDGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVDNKPGLFQSANGGTLFLDEIA
DLPLPMQVKLLRAIQEKAVRPVGDSHEVPVDIRVLSATHKDLPGLVQDGLFRQDLFYRINVIEIRVPPLRERSGDIALLA
RHILLRIAREYECTPIALTDAAVDYLKGYHFPGNVRELENILERAFTLCDGDVIDTGDLQLGSSYSYDNNTDPSLLAPTA
SVVATADIELSEQGLGLEGYLESIERKAIEQALEATRWNKTAAAKKLGISFRALRYKLKKLGLE

Nucleotide

• Length: 1395 bp

>NTDB_id=656480 MIH16_RS04165 WP_249007684.1 874017..875411(-) (pilR) [Marinobacter sp. M4C]
ATGACCAAACTGACCGCGCTGATCGTAGACGACGAACCCGACATCCGTGACCTACTAGAGATAACCCTCAGCCGCATGGG
CCTGAATACGGTCACCGCGGGCACTCTGGCAGGGGGGATCGCAGGCATGCAAAAGCACACGCCAAATTTGTGCCTGACCG
ACATGAACCTGCCAGATGGCAAAGGCATCGAGCTGGTGCAATGGATTCAACAGCATTCCCCCAATACGCCGGTCGCCGTT
ATAACAGCCTACGGCAGTATGGACATCGCCATTGAGTCCCTGAAGGCAGGTGCCTTTGATTTTGTGTCAAAGCCCGTCGA
ATTGCCGCGGCTGCGGGAGCTGGTCAACACTGCCCTGAAACTTGCCCAAAGCCCGGAGCCTGGGCCAGAAGACAATAACG
ACCCGGGCTTGCTGCTGGGCAATTCCGCCCAAATTCAAACCTTACGCAATCAGGCCCGCAAACTGGCTCGCAGCCAAGCG
CCGGTCTTTATTCAAGGCGAATCCGGCAGCGGTAAAGAGCTGGTCGCGCGCACCATTCATCAGCAGGGCCCTAGATGTGA
TGGGCCGTTCATAGCCGTGAACTGTGGCGCTATTCCGTCTGAGTTAATGGAAAGTGAGTTTTTCGGCCACAAAAAAGGCA
GCTTCACCGGAGCGGTGGACAACAAGCCAGGCCTGTTTCAAAGCGCCAACGGCGGCACGCTTTTTCTGGATGAAATCGCC
GACTTACCACTGCCCATGCAAGTAAAGCTGCTGCGCGCCATTCAGGAAAAAGCCGTACGCCCTGTCGGTGACAGCCACGA
AGTGCCGGTCGATATCCGTGTGCTTAGTGCAACCCATAAAGATCTTCCGGGGCTGGTACAAGATGGCCTTTTCCGCCAGG
ACCTGTTCTATCGCATCAACGTGATTGAAATCCGCGTGCCGCCTCTGCGCGAACGCAGCGGTGATATAGCGCTGCTTGCC
AGACACATATTGCTGCGCATCGCCCGCGAATACGAGTGCACACCCATCGCCCTTACCGATGCCGCCGTCGACTATTTAAA
GGGCTACCATTTCCCGGGTAATGTGCGCGAGCTGGAAAACATTCTGGAGCGGGCGTTTACACTTTGCGACGGAGACGTTA
TTGACACCGGCGACCTTCAGCTTGGCAGTTCCTACAGCTATGACAACAACACTGATCCGTCTTTGCTGGCACCCACAGCT
TCGGTAGTGGCAACGGCAGATATTGAACTGTCGGAGCAGGGCCTGGGCCTTGAGGGGTATCTGGAGAGCATAGAGCGCAA
GGCTATTGAACAGGCGCTGGAAGCCACGCGTTGGAATAAAACGGCGGCGGCGAAAAAGCTGGGGATCAGTTTTCGGGCGT
TGCGGTATAAGTTGAAGAAGTTGGGATTGGAGTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (421-461)

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (138-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.366	100	0.625
pilR	Acinetobacter baumannii strain A118	53.057	98.707	0.524