Detailed information NTG0656203

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB07_RS12765
• Genome accession: NZ_CP108203
• Coordinates: 2864816..2866114 (-)
• Length: 432 a.a.
• NCBI ID: WP_103516222.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00111
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2859816..2871114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB07_RS12755 (OHB07_12735)	-	2860982..2863603 (-)	2622	WP_406462376.1	valine--tRNA ligase	-
OHB07_RS12760 (OHB07_12740)	-	2863741..2864745 (+)	1005	WP_406462378.1	hypothetical protein	-
OHB07_RS12765 (OHB07_12745)	clpX	2864816..2866114 (-)	1299	WP_103516222.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB07_RS12770 (OHB07_12750)	clpP	2866272..2866955 (-)	684	WP_329228840.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB07_RS12775 (OHB07_12755)	-	2867023..2867628 (-)	606	WP_198959691.1	ATP-dependent Clp protease proteolytic subunit	-
OHB07_RS12780 (OHB07_12760)	tig	2867927..2869324 (-)	1398	WP_329228842.1	trigger factor	-
OHB07_RS12795 (OHB07_12775)	-	2869994..2870188 (-)	195	WP_069172794.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47343.18 Da
• Isoelectric Point: 4.8277

>NTDB_id=656203 OHB07_RS12765 WP_103516222.1 2864816..2866114(-) (clpX) [Streptomyces sp. NBC_00111]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=656203 OHB07_RS12765 WP_103516222.1 2864816..2866114(-) (clpX) [Streptomyces sp. NBC_00111]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGATGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAGCTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGGGAGAACGGCGGCGGCGCGAACCG
CGACGACGCCATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGACGTCTCGGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGTGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGTCTGC
GCGCCATCATGGAAGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
CCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAACCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509