Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHU24_RS20520 Genome accession   NZ_CP108198
Coordinates   4579564..4580688 (+) Length   374 a.a.
NCBI ID   WP_266673013.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00118     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4574564..4585688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU24_RS20505 (OHU24_20495) - 4575110..4576039 (+) 930 WP_266673019.1 hypothetical protein -
  OHU24_RS20510 (OHU24_20500) - 4576072..4577787 (-) 1716 WP_406317062.1 BACON domain-containing protein -
  OHU24_RS20515 (OHU24_20505) radA/sms 4578042..4579451 (+) 1410 WP_266673015.1 DNA repair protein RadA Machinery gene
  OHU24_RS20520 (OHU24_20510) disA 4579564..4580688 (+) 1125 WP_266673013.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHU24_RS20525 (OHU24_20515) - 4581452..4582246 (-) 795 WP_329434321.1 hypothetical protein -
  OHU24_RS20530 (OHU24_20520) - 4582432..4583073 (+) 642 WP_266673011.1 phosphatase PAP2 family protein -
  OHU24_RS20535 (OHU24_20525) - 4583074..4583721 (-) 648 WP_330279732.1 response regulator transcription factor -
  OHU24_RS20540 (OHU24_20530) - 4583718..4585319 (-) 1602 WP_406317065.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40341.21 Da        Isoelectric Point: 4.9304

>NTDB_id=655960 OHU24_RS20520 WP_266673013.1 4579564..4580688(+) (disA) [Streptomyces sp. NBC_00118]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=655960 OHU24_RS20520 WP_266673013.1 4579564..4580688(+) (disA) [Streptomyces sp. NBC_00118]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGTGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCGGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCCG
TGGTCTCGGTGTCGCAGTCGATGCGGCTCATCGCCCTCTACGTGGACGGGCAGCGGCGCGTCCTCGAGGACTCGGCCGCG
ATTCTCTCGCGGGCGAATCAGGCGCTGGCCACTCTTGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACACTCTC
CGCGCTCGAGATCGAGGATCTCGTGACCGTGCGGGATGTGACCGCGGTCGCGCAGCGGCTGGAAATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGATGGGCGACTGCTCGCCCTTCAGCTCGACGAGTTGATCGCC
GGGGTGGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTACGTGCCCGAACCCACGGCCAAGCGGTCCCGGACCGTCGACGA
GGCCCTGTTCGAACTCGACGCGCTGACGCATGCCGAGCTTCTCGAACTGCCCACTGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAGACCCTGGACTCGGCCGTTTCGCCTCGTGGGTTCCGGCTGTTGGCGAAGGTGCCTCGGCTGCCCGGGGCC
ATCATTGAGCGGCTTGTCGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCCAGCGTCGACGATCTGCAGACCGTGGA
CGGCGTCGGCGAGGCCCGCGCCCGGAGCGTGCGGGAAGGACTCTCACGGTTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433