Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OXB_RS03900 | Genome accession | NZ_AP013294 |
| Coordinates | 732619..735075 (-) | Length | 818 a.a. |
| NCBI ID | WP_041072062.1 | Uniprot ID | A0A0A8JEL8 |
| Organism | Bacillus sp. OxB-1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 727619..740075
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXB_RS03880 (OXB_0732) | ispF | 728571..729047 (-) | 477 | WP_041072053.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| OXB_RS03885 (OXB_0733) | ispD | 729022..729738 (-) | 717 | WP_041072055.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| OXB_RS03890 (OXB_0734) | - | 729805..730917 (-) | 1113 | WP_041072058.1 | PIN/TRAM domain-containing protein | - |
| OXB_RS03895 (OXB_0735) | radA | 731171..732541 (-) | 1371 | WP_041072060.1 | DNA repair protein RadA | Machinery gene |
| OXB_RS03900 (OXB_0736) | clpC | 732619..735075 (-) | 2457 | WP_041072062.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OXB_RS03905 (OXB_0737) | - | 735301..736389 (-) | 1089 | WP_041072064.1 | protein arginine kinase | - |
| OXB_RS03910 (OXB_0738) | - | 736379..736936 (-) | 558 | WP_331711238.1 | UvrB/UvrC motif-containing protein | - |
| OXB_RS03915 (OXB_0739) | - | 736968..737438 (-) | 471 | WP_041072066.1 | CtsR family transcriptional regulator | - |
| OXB_RS03920 (OXB_0740) | - | 737912..739594 (-) | 1683 | WP_041072068.1 | sulfite exporter TauE/SafE family protein | - |
Sequence
Protein
Download Length: 818 a.a. Molecular weight: 90914.63 Da Isoelectric Point: 5.4429
>NTDB_id=65576 OXB_RS03900 WP_041072062.1 732619..735075(-) (clpC) [Bacillus sp. OxB-1]
MMFNRFTQRAQKVLQLAQEEAIRMKHESIGTEHILLGLIREGGGIAAKALEAIDVSFETIEQGVEKLVGTGSKDVGPIVH
YTPRAKKVIELSVDESRKLGHSYIGTEHILLALIREGEGVAARVLNNAGVSLNKARQQVLQLLGSNDSSGGSQGAANSAA
TPTLDSLARDLTEIAREGTLDPVIGRGKEITRVIEVLARRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRMKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPTVEETVQIIYGLRDRYEAHHRVKITDEAIEAAAKMSDRYISDRFLPDKAIDLIDEAG
SKVRLRSYTTPPNLKELESKLEAIRSEKNAAVQSQEFEKAASFRDKEQKMKEELDKTKAAWKEKQGKTESEVTVNDIAEV
VAMWTGVPVSKIATTESAKLLNMEELLHKRVIGQGEAVTAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTVLIMTSNVGAEALKKNRYVGFNLHGTDRDYESMKSTMLDELKKVFRPEFLNRVDEMIVFHSLEKEHL
REIVSLMSNELVKRLEEQEIELQVTDAAKEKISEEGYDPDYGARPLRRAIQKHIEDRLSEELLKGTVLTGGQVVIDVEDG
EFTVRTNEKNEAVEVGEK
MMFNRFTQRAQKVLQLAQEEAIRMKHESIGTEHILLGLIREGGGIAAKALEAIDVSFETIEQGVEKLVGTGSKDVGPIVH
YTPRAKKVIELSVDESRKLGHSYIGTEHILLALIREGEGVAARVLNNAGVSLNKARQQVLQLLGSNDSSGGSQGAANSAA
TPTLDSLARDLTEIAREGTLDPVIGRGKEITRVIEVLARRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRMKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDEPTVEETVQIIYGLRDRYEAHHRVKITDEAIEAAAKMSDRYISDRFLPDKAIDLIDEAG
SKVRLRSYTTPPNLKELESKLEAIRSEKNAAVQSQEFEKAASFRDKEQKMKEELDKTKAAWKEKQGKTESEVTVNDIAEV
VAMWTGVPVSKIATTESAKLLNMEELLHKRVIGQGEAVTAISRAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTVLIMTSNVGAEALKKNRYVGFNLHGTDRDYESMKSTMLDELKKVFRPEFLNRVDEMIVFHSLEKEHL
REIVSLMSNELVKRLEEQEIELQVTDAAKEKISEEGYDPDYGARPLRRAIQKHIEDRLSEELLKGTVLTGGQVVIDVEDG
EFTVRTNEKNEAVEVGEK
Nucleotide
Download Length: 2457 bp
>NTDB_id=65576 OXB_RS03900 WP_041072062.1 732619..735075(-) (clpC) [Bacillus sp. OxB-1]
ATGATGTTCAACCGATTTACACAACGTGCACAAAAGGTATTGCAGCTTGCGCAAGAAGAAGCCATTCGTATGAAACATGA
ATCGATCGGCACGGAGCATATCCTGCTCGGATTGATCCGGGAAGGCGGCGGCATTGCTGCGAAAGCGCTGGAAGCGATCG
ATGTCAGTTTCGAGACCATTGAACAAGGCGTGGAAAAATTGGTCGGCACCGGATCCAAGGACGTCGGCCCGATCGTCCAT
TACACACCGCGCGCTAAAAAGGTGATTGAACTATCTGTGGATGAATCCCGCAAATTGGGCCATTCGTACATCGGCACAGA
GCATATTCTACTTGCGTTGATACGTGAAGGGGAAGGCGTGGCCGCACGGGTATTGAACAACGCAGGGGTCAGCCTCAACA
AAGCCCGTCAACAAGTCCTGCAATTGCTAGGCAGCAACGACAGCTCCGGCGGCAGCCAAGGCGCCGCTAATTCTGCGGCT
ACGCCTACCTTGGACAGTTTGGCTCGCGACTTGACCGAAATCGCACGTGAAGGCACACTCGATCCGGTCATCGGCCGCGG
CAAAGAAATCACCCGTGTTATCGAAGTGCTGGCGCGCCGCACGAAAAACAATCCGGTCCTGATCGGGGAACCGGGCGTCG
GGAAGACGGCGATCGCGGAAGGGCTTGCCCAGCAGATCATTAACAATGAAGTGCCGGAAATCCTTCGCGACAAGCGTGTC
ATGACGCTGGATATGGGTACTGTCGTCGCAGGGACGAAATACCGCGGCGAGTTCGAGGATCGCATGAAAAAAGTGATGGA
GGAAATCCGCCAAGCCGGCAATATCATCCTCTTCATCGATGAGCTCCATACGCTGATCGGCGCTGGGGGAGCAGAAGGCG
CGATTGACGCTTCCAACATCCTGAAGCCGTCGCTTGCCCGCGGCGAATTGCAATGTATCGGTGCTACGACATTGGATGAA
TACCGTAAATATATCGAAAAAGACGCTGCGCTGGAGCGCCGTTTCCAACCGATCCAAGTCGACGAGCCGACTGTCGAGGA
GACCGTCCAGATTATATACGGCCTGCGCGATCGCTATGAAGCTCACCACCGTGTGAAAATCACGGATGAAGCGATCGAAG
CGGCTGCAAAAATGTCCGATCGTTATATCTCCGACCGATTCCTTCCGGATAAGGCGATCGACTTGATTGACGAAGCGGGA
TCGAAAGTGCGTCTCCGCTCCTATACGACTCCTCCCAATCTGAAAGAGCTGGAGTCGAAATTGGAAGCGATCCGCTCCGA
GAAGAATGCGGCCGTCCAAAGCCAGGAATTCGAAAAAGCAGCGTCCTTTCGTGACAAAGAACAGAAGATGAAAGAAGAAC
TGGATAAGACGAAAGCGGCTTGGAAAGAAAAGCAGGGCAAAACGGAGTCCGAGGTGACGGTCAACGATATTGCCGAAGTG
GTAGCGATGTGGACCGGAGTTCCTGTCTCGAAGATTGCGACGACGGAAAGCGCCAAATTGCTGAACATGGAAGAATTGCT
CCATAAGCGCGTCATCGGCCAAGGCGAAGCAGTAACTGCCATTTCACGGGCGATCCGCCGGGCGCGTGCCGGTTTGAAAG
ATCCAAAACGCCCAATCGGTTCCTTCATCTTCCTTGGACCAACAGGGGTCGGGAAAACGGAACTTGCCCGGGCGCTCGCT
GAATCGATGTTCGGAGACGAAGATGCGATGATCCGGATCGACATGTCCGAATATATGGAGAAGCATTCCACCTCCCGTCT
CGTCGGTTCGCCTCCGGGATATGTCGGTTACGATGAGGGCGGCCAGTTGACGGAGAAAGTCCGCCGCAAACCGTACTCAG
TCGTCCTATTGGATGAAATCGAGAAAGCCCACCCTGACGTCTTCAACATCTTGCTGCAAGTGTTGGAAGACGGCAGATTG
ACAGATTCGAAAGGCCGTACAGTGGATTTCCGCAATACGGTGCTCATCATGACATCGAACGTCGGTGCTGAAGCGTTGAA
GAAAAACCGTTATGTCGGCTTCAATTTGCACGGTACGGACCGCGATTACGAAAGCATGAAATCGACAATGCTTGACGAGC
TGAAGAAAGTGTTCCGTCCAGAGTTCTTGAACCGTGTGGATGAAATGATTGTGTTCCACTCATTGGAAAAAGAGCATTTG
CGCGAAATTGTTTCACTCATGTCTAACGAGTTGGTCAAACGTCTTGAAGAGCAGGAAATCGAACTGCAAGTCACAGACGC
AGCGAAAGAGAAAATCTCCGAGGAAGGCTATGATCCGGACTACGGAGCACGCCCATTGCGCCGTGCCATCCAGAAACATA
TCGAAGACCGCTTATCGGAAGAACTATTGAAAGGCACTGTCCTGACAGGCGGCCAAGTGGTGATCGATGTGGAAGACGGG
GAATTCACCGTCCGGACGAACGAGAAGAACGAAGCAGTGGAAGTTGGAGAAAAATAA
ATGATGTTCAACCGATTTACACAACGTGCACAAAAGGTATTGCAGCTTGCGCAAGAAGAAGCCATTCGTATGAAACATGA
ATCGATCGGCACGGAGCATATCCTGCTCGGATTGATCCGGGAAGGCGGCGGCATTGCTGCGAAAGCGCTGGAAGCGATCG
ATGTCAGTTTCGAGACCATTGAACAAGGCGTGGAAAAATTGGTCGGCACCGGATCCAAGGACGTCGGCCCGATCGTCCAT
TACACACCGCGCGCTAAAAAGGTGATTGAACTATCTGTGGATGAATCCCGCAAATTGGGCCATTCGTACATCGGCACAGA
GCATATTCTACTTGCGTTGATACGTGAAGGGGAAGGCGTGGCCGCACGGGTATTGAACAACGCAGGGGTCAGCCTCAACA
AAGCCCGTCAACAAGTCCTGCAATTGCTAGGCAGCAACGACAGCTCCGGCGGCAGCCAAGGCGCCGCTAATTCTGCGGCT
ACGCCTACCTTGGACAGTTTGGCTCGCGACTTGACCGAAATCGCACGTGAAGGCACACTCGATCCGGTCATCGGCCGCGG
CAAAGAAATCACCCGTGTTATCGAAGTGCTGGCGCGCCGCACGAAAAACAATCCGGTCCTGATCGGGGAACCGGGCGTCG
GGAAGACGGCGATCGCGGAAGGGCTTGCCCAGCAGATCATTAACAATGAAGTGCCGGAAATCCTTCGCGACAAGCGTGTC
ATGACGCTGGATATGGGTACTGTCGTCGCAGGGACGAAATACCGCGGCGAGTTCGAGGATCGCATGAAAAAAGTGATGGA
GGAAATCCGCCAAGCCGGCAATATCATCCTCTTCATCGATGAGCTCCATACGCTGATCGGCGCTGGGGGAGCAGAAGGCG
CGATTGACGCTTCCAACATCCTGAAGCCGTCGCTTGCCCGCGGCGAATTGCAATGTATCGGTGCTACGACATTGGATGAA
TACCGTAAATATATCGAAAAAGACGCTGCGCTGGAGCGCCGTTTCCAACCGATCCAAGTCGACGAGCCGACTGTCGAGGA
GACCGTCCAGATTATATACGGCCTGCGCGATCGCTATGAAGCTCACCACCGTGTGAAAATCACGGATGAAGCGATCGAAG
CGGCTGCAAAAATGTCCGATCGTTATATCTCCGACCGATTCCTTCCGGATAAGGCGATCGACTTGATTGACGAAGCGGGA
TCGAAAGTGCGTCTCCGCTCCTATACGACTCCTCCCAATCTGAAAGAGCTGGAGTCGAAATTGGAAGCGATCCGCTCCGA
GAAGAATGCGGCCGTCCAAAGCCAGGAATTCGAAAAAGCAGCGTCCTTTCGTGACAAAGAACAGAAGATGAAAGAAGAAC
TGGATAAGACGAAAGCGGCTTGGAAAGAAAAGCAGGGCAAAACGGAGTCCGAGGTGACGGTCAACGATATTGCCGAAGTG
GTAGCGATGTGGACCGGAGTTCCTGTCTCGAAGATTGCGACGACGGAAAGCGCCAAATTGCTGAACATGGAAGAATTGCT
CCATAAGCGCGTCATCGGCCAAGGCGAAGCAGTAACTGCCATTTCACGGGCGATCCGCCGGGCGCGTGCCGGTTTGAAAG
ATCCAAAACGCCCAATCGGTTCCTTCATCTTCCTTGGACCAACAGGGGTCGGGAAAACGGAACTTGCCCGGGCGCTCGCT
GAATCGATGTTCGGAGACGAAGATGCGATGATCCGGATCGACATGTCCGAATATATGGAGAAGCATTCCACCTCCCGTCT
CGTCGGTTCGCCTCCGGGATATGTCGGTTACGATGAGGGCGGCCAGTTGACGGAGAAAGTCCGCCGCAAACCGTACTCAG
TCGTCCTATTGGATGAAATCGAGAAAGCCCACCCTGACGTCTTCAACATCTTGCTGCAAGTGTTGGAAGACGGCAGATTG
ACAGATTCGAAAGGCCGTACAGTGGATTTCCGCAATACGGTGCTCATCATGACATCGAACGTCGGTGCTGAAGCGTTGAA
GAAAAACCGTTATGTCGGCTTCAATTTGCACGGTACGGACCGCGATTACGAAAGCATGAAATCGACAATGCTTGACGAGC
TGAAGAAAGTGTTCCGTCCAGAGTTCTTGAACCGTGTGGATGAAATGATTGTGTTCCACTCATTGGAAAAAGAGCATTTG
CGCGAAATTGTTTCACTCATGTCTAACGAGTTGGTCAAACGTCTTGAAGAGCAGGAAATCGAACTGCAAGTCACAGACGC
AGCGAAAGAGAAAATCTCCGAGGAAGGCTATGATCCGGACTACGGAGCACGCCCATTGCGCCGTGCCATCCAGAAACATA
TCGAAGACCGCTTATCGGAAGAACTATTGAAAGGCACTGTCCTGACAGGCGGCCAAGTGGTGATCGATGTGGAAGACGGG
GAATTCACCGTCCGGACGAACGAGAAGAACGAAGCAGTGGAAGTTGGAGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
79.604 |
98.9 |
0.787 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.876 |
98.289 |
0.49 |
| clpC | Streptococcus thermophilus LMD-9 |
45.923 |
100 |
0.468 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.564 |
100 |
0.465 |
| clpC | Streptococcus mutans UA159 |
44.619 |
100 |
0.451 |
| clpC | Streptococcus pneumoniae D39 |
49.725 |
88.753 |
0.441 |
| clpC | Streptococcus pneumoniae Rx1 |
49.725 |
88.753 |
0.441 |
| clpC | Streptococcus pneumoniae TIGR4 |
49.587 |
88.753 |
0.44 |
| clpE | Streptococcus mutans UA159 |
54.448 |
79.707 |
0.434 |
| clpE | Streptococcus pneumoniae R6 |
54.046 |
80.073 |
0.433 |
| clpE | Streptococcus pneumoniae TIGR4 |
54.046 |
80.073 |
0.433 |
| clpE | Streptococcus pneumoniae Rx1 |
54.046 |
80.073 |
0.433 |
| clpE | Streptococcus pneumoniae D39 |
54.046 |
80.073 |
0.433 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.232 |
82.152 |
0.429 |