Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA44_RS16555 Genome accession   NZ_CP108175
Coordinates   3767100..3768251 (+) Length   383 a.a.
NCBI ID   WP_266854642.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00144     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3762100..3773251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA44_RS16540 (OHA44_16530) - 3762739..3763584 (+) 846 WP_405753444.1 hypothetical protein -
  OHA44_RS16545 (OHA44_16535) - 3763750..3765462 (-) 1713 WP_405753443.1 BACON domain-containing protein -
  OHA44_RS16550 (OHA44_16540) radA/sms 3765646..3767043 (+) 1398 WP_266854640.1 DNA repair protein RadA Machinery gene
  OHA44_RS16555 (OHA44_16545) disA 3767100..3768251 (+) 1152 WP_266854642.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA44_RS16560 (OHA44_16550) - 3768374..3769222 (-) 849 WP_406349481.1 hypothetical protein -
  OHA44_RS16565 (OHA44_16555) - 3769406..3770014 (+) 609 WP_328378114.1 phosphatase PAP2 family protein -
  OHA44_RS16570 (OHA44_16560) - 3770091..3771029 (+) 939 WP_328378113.1 A/G-specific adenine glycosylase -
  OHA44_RS16575 (OHA44_16565) - 3771205..3771756 (+) 552 WP_266854649.1 SigE family RNA polymerase sigma factor -
  OHA44_RS16580 (OHA44_16570) - 3771744..3772493 (+) 750 WP_406348203.1 hypothetical protein -
  OHA44_RS16585 (OHA44_16575) cseB 3772506..3773204 (+) 699 WP_328378111.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41092.03 Da        Isoelectric Point: 5.1127

>NTDB_id=655494 OHA44_RS16555 WP_266854642.1 3767100..3768251(+) (disA) [Streptomyces sp. NBC_00144]
MAANDRAAPGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTSPRAASGRGPQRSRTVAEALVDLNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLL
AKVPRLPGAIIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=655494 OHA44_RS16555 WP_266854642.1 3767100..3768251(+) (disA) [Streptomyces sp. NBC_00144]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCTGTCGCGCCCGGTACCGCTCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGTTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCCGGCGTCCAGCTCGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCATCGCACGGCGGACCGGGTCTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCGCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCTGTCGCGCAGCGTCTTGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGACTGCTCTCCCTCCAGCTGGACGAGCTGATCGCG
GGGGTCGAGCCGGAGCGGGAGCTGGTGGTCAGGGACTACGTGCCGGAGCCCACCTCCCCCAGAGCTGCCTCCGGGAGGGG
CCCCCAGCGTTCGCGTACGGTCGCCGAGGCGCTGGTCGACCTCAACACGCTCAGCCACACGGAGCTGCTCGAACTGCCCG
TGGTGGCAAGGGCGCTGGGGTACAGCGGCTCCCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTG
GCCAAGGTGCCGAGGCTGCCGGGGGCGATCATCGAACGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGC
CAGCGTGGATGATCTGCAGGCGGTGGACGGCGTCGGGGAGGCGCGGGCCCGTAGCGTCCGGGAAGGCCTTTCGCGGCTCG
CGGAGTCGTCGATTCTGGAGCGGTACGTCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.628

94.778

0.423