Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AH5611_RS12855 Genome accession   NZ_CP092055
Coordinates   2598729..2599394 (-) Length   221 a.a.
NCBI ID   WP_000697883.1    Uniprot ID   A0A5F0HLH2
Organism   Staphylococcus aureus strain USA600     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2593729..2604394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AH5611_RS12835 - 2594183..2594296 (-) 114 WP_072468803.1 hypothetical protein -
  AH5611_RS12840 (AH5611_002472) - 2594971..2596971 (-) 2001 WP_000776737.1 ABC transporter permease -
  AH5611_RS12845 (AH5611_002473) - 2596968..2597723 (-) 756 WP_000923765.1 ABC transporter ATP-binding protein -
  AH5611_RS12850 (AH5611_002474) braS 2597831..2598718 (-) 888 WP_000143415.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  AH5611_RS12855 (AH5611_002475) braR 2598729..2599394 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  AH5611_RS12860 (AH5611_002476) - 2599420..2599620 (-) 201 WP_000604722.1 hypothetical protein -
  AH5611_RS12865 (AH5611_002477) - 2599818..2601242 (+) 1425 WP_000953745.1 alkaline phosphatase -
  AH5611_RS12870 - 2601312..2601422 (+) 111 WP_001791296.1 hypothetical protein -
  AH5611_RS12875 (AH5611_002479) - 2601525..2601980 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  AH5611_RS12880 (AH5611_002480) - 2602220..2602981 (-) 762 WP_000323450.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25433.52 Da        Isoelectric Point: 4.7961

>NTDB_id=655493 AH5611_RS12855 WP_000697883.1 2598729..2599394(-) (braR) [Staphylococcus aureus strain USA600]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=655493 AH5611_RS12855 WP_000697883.1 2598729..2599394(-) (braR) [Staphylococcus aureus strain USA600]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGTCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HLH2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995