Detailed information NTG0655398

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHU19_RS19535
• Genome accession: NZ_CP108174
• Coordinates: 4144993..4146279 (-)
• Length: 428 a.a.
• NCBI ID: WP_116512991.1
• Uniprot ID: A0ABV4SEI4
• Organism: Streptomyces sp. NBC_00145
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4139993..4151279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHU19_RS19520 (OHU19_19545)	-	4140357..4140995 (+)	639	WP_327577621.1	hypothetical protein	-
OHU19_RS19525 (OHU19_19550)	-	4141121..4143751 (-)	2631	WP_326713022.1	valine--tRNA ligase	-
OHU19_RS19530 (OHU19_19555)	-	4143937..4144911 (+)	975	WP_326713021.1	hypothetical protein	-
OHU19_RS19535 (OHU19_19560)	clpX	4144993..4146279 (-)	1287	WP_116512991.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHU19_RS19540 (OHU19_19565)	clpP	4146435..4147094 (-)	660	WP_227294656.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHU19_RS19545 (OHU19_19570)	clpP	4147148..4147756 (-)	609	WP_266569404.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHU19_RS19550 (OHU19_19575)	tig	4148041..4149429 (-)	1389	WP_266564251.1	trigger factor	-
OHU19_RS19565 (OHU19_19590)	-	4149946..4150140 (-)	195	WP_100594330.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46850.55 Da
• Isoelectric Point: 4.7856

>NTDB_id=655398 OHU19_RS19535 WP_116512991.1 4144993..4146279(-) (clpX) [Streptomyces sp. NBC_00145]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDVRGSGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=655398 OHU19_RS19535 WP_116512991.1 4144993..4146279(-) (clpX) [Streptomyces sp. NBC_00145]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAAGGCTATGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTCTCGGTCGCTGTGTACAACCATTACAAGCGGGTTCAGGCCGGTGAGAACGGCGGAGCCCAGGGACG
CGACGACGCGATCGAGCTGTCGAAGTCCAACATCCTGCTCCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGTGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTCGAGGGGACCACGGCTTCCGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCATCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCCTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCGCACAGGCGCGCGCGGCCTGC
GTGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCAGAGGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCCCGCGACGTCCGCGGCTCGGGCAGCGGAGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.479	96.495	0.526