Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG553_RS19020 Genome accession   NZ_CP108161
Coordinates   4115808..4116932 (-) Length   374 a.a.
NCBI ID   WP_405980131.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00158     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4110808..4121932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG553_RS18995 (OG553_18960) - 4111487..4112140 (-) 654 WP_405980127.1 hypothetical protein -
  OG553_RS19000 (OG553_18965) - 4112179..4112739 (-) 561 WP_007264805.1 SigE family RNA polymerase sigma factor -
  OG553_RS19005 (OG553_18970) - 4112966..4113901 (-) 936 WP_405980128.1 A/G-specific adenine glycosylase -
  OG553_RS19010 (OG553_18975) - 4113925..4114545 (-) 621 WP_405980129.1 phosphatase PAP2 family protein -
  OG553_RS19015 (OG553_18980) - 4114706..4115503 (+) 798 WP_405980130.1 hypothetical protein -
  OG553_RS19020 (OG553_18985) disA 4115808..4116932 (-) 1125 WP_405980131.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG553_RS19025 (OG553_18990) radA/sms 4117234..4118649 (-) 1416 WP_405980132.1 DNA repair protein RadA Machinery gene
  OG553_RS19030 (OG553_18995) - 4119066..4120799 (+) 1734 WP_405980133.1 BACON domain-containing protein -
  OG553_RS19035 (OG553_19000) - 4120822..4121625 (-) 804 WP_405980134.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40309.32 Da        Isoelectric Point: 5.1222

>NTDB_id=655159 OG553_RS19020 WP_405980131.1 4115808..4116932(-) (disA) [Streptomyces sp. NBC_00158]
MAAKDGAAASGKSGASSKHEALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=655159 OG553_RS19020 WP_405980131.1 4115808..4116932(-) (disA) [Streptomyces sp. NBC_00158]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCCGGCGCGAGCTCCAAGCACGAGGCGTTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCTGGTCAGCCCCTGCGCGACGGGCTGGAGCGGATCGTCCGCGGCAACACGGGCGGTTTGATCGTCC
TGGGCATGGACAAGGCCGTCGAGGCGATGTGCACCGGCGGCTTCGTACTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTCGACGGGGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTACAGCTGGTGCC
CGACGCGTCGATCCCCACGGAGGAGACGGGCACCCGTCACCGCACGGCGGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACCGCCGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAAATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTCTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAACGGGAGCTGGTGATCCGGGACTACGTTCCGGAACCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
GGCGCTGCCGGCACTGGACGCGCTGACGCATCCGGAACTGCTGGAGCTGGCGATCGTGGCGAAGGCGCTCGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCCCGCGGGTACCGGCTGCTGGCGAAGGTTCCGAGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAACTGCTGGCGGCGTCGGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGTGCGCGCAGCGTCCGCGAGGGGTTGTCCCGCCTGGCGGAGTCCTCGATCCTCGAACGCTATG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447