Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG851_RS22835 Genome accession   NZ_CP108156
Coordinates   4902390..4903514 (-) Length   374 a.a.
NCBI ID   WP_266626819.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00161     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4897390..4908514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG851_RS22805 (OG851_22735) cseB 4897610..4898323 (-) 714 WP_266626826.1 two-component system response regulator CseB -
  OG851_RS22810 (OG851_22740) - 4898386..4899024 (-) 639 WP_406514208.1 hypothetical protein -
  OG851_RS22815 (OG851_22745) - 4899063..4899635 (-) 573 WP_030158464.1 SigE family RNA polymerase sigma factor -
  OG851_RS22820 (OG851_22750) - 4899819..4900772 (-) 954 WP_266626824.1 A/G-specific adenine glycosylase -
  OG851_RS22825 (OG851_22755) - 4900796..4901410 (-) 615 WP_266626823.1 phosphatase PAP2 family protein -
  OG851_RS22830 (OG851_22760) - 4901580..4902368 (+) 789 WP_323179102.1 hypothetical protein -
  OG851_RS22835 (OG851_22765) disA 4902390..4903514 (-) 1125 WP_266626819.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG851_RS22840 (OG851_22770) radA/sms 4903769..4905172 (-) 1404 WP_406512517.1 DNA repair protein RadA Machinery gene
  OG851_RS22845 (OG851_22775) - 4905344..4907062 (+) 1719 WP_266626815.1 BACON domain-containing protein -
  OG851_RS22850 (OG851_22780) - 4907117..4907866 (-) 750 WP_389874932.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40362.36 Da        Isoelectric Point: 5.0260

>NTDB_id=655075 OG851_RS22835 WP_266626819.1 4902390..4903514(-) (disA) [Streptomyces sp. NBC_00161]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELGIVARALGYTGSPETLDSAVSPRGYRLLAKIPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=655075 OG851_RS22835 WP_266626819.1 4902390..4903514(-) (disA) [Streptomyces sp. NBC_00161]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGAAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGTGACGGTCTGGAACGGATCGTCCGCGGCAACACCGGCGGCCTCATCGTCC
TCGGGATGGACAAGAGCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTCCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACGGGCACCCGTCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGGTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGGTTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGGACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTGCGCCGCATTG
CCACGGAAATCGCTGAATACGTGGTCGAGCTGGGCACGGACGGGCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTATGTGCCGGAGCCGACGGCGAAGCGCTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAGCTCGGGATCGTGGCGCGGGCGCTTGGGTACACGG
GCTCGCCGGAGACGCTCGACTCGGCGGTGTCCCCGCGGGGGTACCGGCTGCTGGCGAAGATTCCGCGGCTGCCGGGGGCC
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGTCGGTGGACGATCTGCAGACGGTCGA
CGGGGTCGGGGAAGCCCGTGCGCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCCTCGATCCTCGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444