Detailed information NTG0654798

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT61_RS10815
• Genome accession: NZ_CP108143
• Coordinates: 2499984..2501285 (-)
• Length: 433 a.a.
• NCBI ID: WP_329037264.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00178
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2494984..2506285

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT61_RS10805 (OHT61_10795)	-	2496113..2498734 (-)	2622	WP_329037260.1	valine--tRNA ligase	-
OHT61_RS10810 (OHT61_10800)	-	2498873..2499913 (+)	1041	WP_329037262.1	hypothetical protein	-
OHT61_RS10815 (OHT61_10805)	clpX	2499984..2501285 (-)	1302	WP_329037264.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT61_RS10820 (OHT61_10810)	clpP	2501442..2502125 (-)	684	WP_019992624.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT61_RS10825 (OHT61_10815)	-	2502192..2502797 (-)	606	WP_327122356.1	ATP-dependent Clp protease proteolytic subunit	-
OHT61_RS10830 (OHT61_10820)	tig	2503071..2504462 (-)	1392	WP_329037265.1	trigger factor	-
OHT61_RS10845 (OHT61_10835)	-	2504998..2505192 (-)	195	WP_329037267.1	hypothetical protein	-

Sequence

Protein

• Length: 433 a.a.
• Molecular weight: 47460.28 Da
• Isoelectric Point: 4.8305

>NTDB_id=654798 OHT61_RS10815 WP_329037264.1 2499984..2501285(-) (clpX) [Streptomyces sp. NBC_00178]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGSGSNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNEGGGRHEKSA

Nucleotide

• Length: 1302 bp

>NTDB_id=654798 OHT61_RS10815 WP_329037264.1 2499984..2501285(-) (clpX) [Streptomyces sp. NBC_00178]
GTGGCACGCATCGGTGATGGCGGCGACTTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGTGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCAGCGGTTCGAATCG
TGACGACGCGATCGAGCTCGCCAAGTCGAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGGGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCGGGTCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAAGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTACTGACCTCGGTCCACAACCTGGACCGT
GAGGCACTGCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCGATCCTGCGCCAGACGGGCGCGCGTGGTCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
CCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGAGGGCGGCGG
CCGCCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.179	92.841	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.15	0.508