Detailed information NTG0654724

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG778_RS08945
• Genome accession: NZ_CP108137
• Coordinates: 2086430..2087728 (-)
• Length: 432 a.a.
• NCBI ID: WP_148018684.1
• Uniprot ID: A0ABY9IW47
• Organism: Streptomyces sp. NBC_00184
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2081430..2092728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG778_RS08935 (OG778_08940)	-	2082597..2085218 (-)	2622	WP_328948547.1	valine--tRNA ligase	-
OG778_RS08940 (OG778_08945)	-	2085358..2086356 (+)	999	WP_328948548.1	hypothetical protein	-
OG778_RS08945 (OG778_08950)	clpX	2086430..2087728 (-)	1299	WP_148018684.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG778_RS08950 (OG778_08955)	clpP	2087885..2088568 (-)	684	WP_306070064.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG778_RS08955 (OG778_08960)	-	2088649..2089254 (-)	606	WP_168713553.1	ATP-dependent Clp protease proteolytic subunit	-
OG778_RS08960 (OG778_08965)	tig	2089521..2090915 (-)	1395	WP_219569644.1	trigger factor	-
OG778_RS08975 (OG778_08980)	-	2091495..2091689 (-)	195	WP_219569646.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47403.23 Da
• Isoelectric Point: 4.8390

>NTDB_id=654724 OG778_RS08945 WP_148018684.1 2086430..2087728(-) (clpX) [Streptomyces sp. NBC_00184]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDEGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=654724 OG778_RS08945 WP_148018684.1 2086430..2087728(-) (clpX) [Streptomyces sp. NBC_00184]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGGCGCGAACCG
CGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTCGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGTTGGAGTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGTGACGAGGGGCG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516