Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG429_RS21775 Genome accession   NZ_CP108131
Coordinates   4512297..4513421 (-) Length   374 a.a.
NCBI ID   WP_328926971.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00190     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4507297..4518421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG429_RS21745 (OG429_21770) cseB 4507555..4508265 (-) 711 WP_328926967.1 two-component system response regulator CseB -
  OG429_RS21750 (OG429_21775) - 4508295..4508927 (-) 633 WP_328930366.1 hypothetical protein -
  OG429_RS21755 (OG429_21780) - 4508966..4509526 (-) 561 WP_319727094.1 SigE family RNA polymerase sigma factor -
  OG429_RS21760 (OG429_21785) - 4509734..4510642 (-) 909 WP_328926968.1 A/G-specific adenine glycosylase -
  OG429_RS21765 (OG429_21790) - 4510639..4511280 (-) 642 WP_328926969.1 phosphatase PAP2 family protein -
  OG429_RS21770 (OG429_21795) - 4511441..4512265 (+) 825 WP_328926970.1 hypothetical protein -
  OG429_RS21775 (OG429_21800) disA 4512297..4513421 (-) 1125 WP_328926971.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG429_RS21780 (OG429_21805) radA/sms 4513582..4514982 (-) 1401 WP_328926972.1 DNA repair protein RadA Machinery gene
  OG429_RS21785 (OG429_21810) - 4515165..4516925 (+) 1761 WP_328926973.1 hypothetical protein -
  OG429_RS21790 (OG429_21815) - 4516949..4517737 (-) 789 WP_328930367.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40351.42 Da        Isoelectric Point: 5.1189

>NTDB_id=654672 OG429_RS21775 WP_328926971.1 4512297..4513421(-) (disA) [Streptomyces sp. NBC_00190]
MAAKDGASAPGKSGASSKHDALMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKAVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQMVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=654672 OG429_RS21775 WP_328926971.1 4512297..4513421(-) (disA) [Streptomyces sp. NBC_00190]
GTGGCAGCCAAGGACGGGGCATCAGCACCCGGGAAGTCCGGCGCGAGCTCCAAGCACGACGCGCTCATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCACTGCGCGACGGCCTTGAGCGGATCGTCCGCGGCAACACCGGCGGCCTCATCGTCC
TCGGCATGGACAAGGCCGTCGAGGCGATGTGCACGGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACCTCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTGCC
GGACGCATCGATCCCGACGGAGGAGACCGGCACGCGCCACCGCACGGCGGACCGCGTCTCCAAGCAGTGCGGGTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAGCTGGGTACGGACGGCCGGCTGCTGTCGCTGCAGCTGGACGAGCTGACGGTC
GGAATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACCCATCCCGAGCTGCTGGAGCTGGCGATCGTGGCGAAGGCGCTGGGGTACACCG
GGTCGCCGGAGACCCTGGACTCGGCCGTGTCGCCGCGGGGCTACCGGCTGCTGGCGAAGGTTCCCCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGATCTGCAGATGGTGGA
CGGCGTGGGCGAGGCCCGTGCCCGCAGCGTCCGCGAGGGCCTCTCGCGGCTCGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444