Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG867_RS18075 Genome accession   NZ_CP108121
Coordinates   3984209..3985333 (-) Length   374 a.a.
NCBI ID   WP_328900824.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00209     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3979209..3990333
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG867_RS18050 (OG867_18050) cseB 3979895..3980599 (-) 705 WP_328900827.1 two-component system response regulator CseB -
  OG867_RS18055 (OG867_18055) - 3980610..3981335 (-) 726 WP_406286605.1 hypothetical protein -
  OG867_RS18060 (OG867_18060) - 3981323..3981871 (-) 549 WP_018102282.1 SigE family RNA polymerase sigma factor -
  OG867_RS18065 (OG867_18065) - 3982177..3983079 (-) 903 WP_328900825.1 A/G-specific adenine glycosylase -
  OG867_RS18070 (OG867_18070) - 3983413..3984180 (+) 768 WP_406291021.1 hypothetical protein -
  OG867_RS18075 (OG867_18075) disA 3984209..3985333 (-) 1125 WP_328900824.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG867_RS18080 (OG867_18080) radA/sms 3985459..3986871 (-) 1413 WP_328900823.1 DNA repair protein RadA Machinery gene
  OG867_RS18085 (OG867_18085) - 3987006..3988844 (+) 1839 WP_406286607.1 hypothetical protein -
  OG867_RS18090 (OG867_18090) - 3988858..3989631 (-) 774 WP_406291024.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40436.40 Da        Isoelectric Point: 5.0161

>NTDB_id=654265 OG867_RS18075 WP_328900824.1 3984209..3985333(-) (disA) [Streptomyces sp. NBC_00209]
MAASDRAASPGKSGQTTGNEALMRASLSAVAPGMALRDGLERILRGNTGALIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=654265 OG867_RS18075 WP_328900824.1 3984209..3985333(-) (disA) [Streptomyces sp. NBC_00209]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAACCACGGGCAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGGGCTCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGGCCAAGCTGGACGGCGCCCTGATCCTCGACAAGGACATGACGAAGATCCTGCGCGCCGGGGTGCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGAACGGGGAGCGGCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTCGCCGGGACGCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTGGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTGGAGCTCGGCACGGACGGACGGCTGCTGTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCACGCACGGTGGCGGA
GGCGCTGACCGAGCTGGACTCGCTGACCCACACGGAGCTGCTCGAACTTCCGGTGGTCGCGAGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCCCGGGCGCGCAGCGTGCGCGAGGGCCTGTCCCGGCTGGCCGAGTCGTCCATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.321

96.524

0.428