Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG820_RS18190 Genome accession   NZ_CP108118
Coordinates   3963093..3964217 (+) Length   374 a.a.
NCBI ID   WP_329314225.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00211     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3958093..3969217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG820_RS18175 (OG820_18150) - 3958685..3959518 (+) 834 WP_327284713.1 hypothetical protein -
  OG820_RS18180 (OG820_18155) - 3959544..3961319 (-) 1776 WP_405756426.1 BACON domain-containing protein -
  OG820_RS18185 (OG820_18160) radA/sms 3961517..3962920 (+) 1404 WP_327284711.1 DNA repair protein RadA Machinery gene
  OG820_RS18190 (OG820_18165) disA 3963093..3964217 (+) 1125 WP_329314225.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG820_RS18195 (OG820_18170) - 3964281..3965084 (-) 804 WP_327285735.1 hypothetical protein -
  OG820_RS18200 (OG820_18175) - 3965254..3965868 (+) 615 WP_327284709.1 phosphatase PAP2 family protein -
  OG820_RS18205 (OG820_18180) - 3965892..3966857 (+) 966 WP_327284708.1 A/G-specific adenine glycosylase -
  OG820_RS18210 (OG820_18185) - 3967032..3967604 (+) 573 WP_030867865.1 SigE family RNA polymerase sigma factor -
  OG820_RS18215 (OG820_18190) - 3967643..3968281 (+) 639 WP_327285734.1 hypothetical protein -
  OG820_RS18220 (OG820_18195) cseB 3968312..3969025 (+) 714 WP_327284707.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40316.27 Da        Isoelectric Point: 5.0260

>NTDB_id=654099 OG820_RS18190 WP_329314225.1 3963093..3964217(+) (disA) [Streptomyces sp. NBC_00211]
MAAKDGAAASGKSGASSKQEAMVRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELGIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=654099 OG820_RS18190 WP_329314225.1 3963093..3964217(+) (disA) [Streptomyces sp. NBC_00211]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGGTGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGCGACGGCCTGGAACGGATCGTCCGCGGCAACACCGGCGGCCTCATCGTGC
TCGGGATGGACAAGTCCGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACGGGCACCCGTCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGGTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGCCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCCGGGACGCTGTC
CGCGTTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTAGCCCAGCGGCTGGAAATGGTCCGCCGCATTG
CCACGGAAATCGCTGAATACGTGGTCGAGCTGGGCACGGACGGGCGACTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACCGCGAAGCGCTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCACCCGGAGCTGCTGGAGCTCGGCATCGTGGCGCGGGCGCTGGGGTACACGG
GCTCGCCCGAGACCCTGGACTCGGCGGTGTCCCCGCGGGGCTACCGGCTGCTGGCGAAGGTTCCGCGGCTGCCAGGTGCC
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCGGCGTCGGTGGACGACCTGCAGACCGTGGA
CGGCGTGGGCGAGGCGCGGGCGCGGAGCGTCCGCGAGGGCCTGTCGCGCCTGGCGGAGTCCTCGATCCTCGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441