Detailed information NTG0654065

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: MAK48_RS19350
• Genome accession: NZ_CP091872
• Coordinates: 3738643..3739788 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus sp. Man122
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3733643..3744788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MAK48_RS19330 (MAK48_19330)	-	3733659..3734939 (+)	1281	WP_003242974.1	pitrilysin family protein	-
MAK48_RS19335 (MAK48_19335)	albG	3734936..3735637 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
MAK48_RS19340 (MAK48_19340)	-	3735643..3737019 (-)	1377	WP_003244415.1	YncE family protein	-
MAK48_RS19345 (MAK48_19345)	-	3737058..3738413 (-)	1356	WP_003227552.1	YncE family protein	-
MAK48_RS21260	-	3738410..3738640 (-)	231	WP_009968328.1	hypothetical protein	-
MAK48_RS19350 (MAK48_19350)	rapF	3738643..3739788 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
MAK48_RS19355 (MAK48_19355)	phrF	3739772..3739891 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
MAK48_RS19360 (MAK48_19360)	-	3739990..3740463 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
MAK48_RS19365 (MAK48_19365)	speB	3740495..3741367 (-)	873	WP_003227545.1	agmatinase	-
MAK48_RS19370 (MAK48_19370)	speE	3741428..3742258 (-)	831	WP_003227543.1	spermidine synthase	-
MAK48_RS19375 (MAK48_19375)	-	3742460..3744535 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=654065 MAK48_RS19350 WP_003227549.1 3738643..3739788(+) (rapF) [Bacillus sp. Man122]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=654065 MAK48_RS19350 WP_003227549.1 3738643..3739788(+) (rapF) [Bacillus sp. Man122]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572