Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG965_RS23310 Genome accession   NZ_CP108106
Coordinates   5227632..5228756 (-) Length   374 a.a.
NCBI ID   WP_371654017.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00224     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5222632..5233756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG965_RS23285 (OG965_23230) - 5223276..5223878 (-) 603 WP_371654012.1 hypothetical protein -
  OG965_RS23290 (OG965_23235) - 5223920..5224528 (-) 609 WP_371654013.1 SigE family RNA polymerase sigma factor -
  OG965_RS23295 (OG965_23240) - 5224869..5225780 (-) 912 WP_371654014.1 A/G-specific adenine glycosylase -
  OG965_RS23300 (OG965_23245) - 5225833..5226447 (-) 615 WP_371654015.1 phosphatase PAP2 family protein -
  OG965_RS23305 (OG965_23250) - 5226560..5227402 (+) 843 WP_371654016.1 hypothetical protein -
  OG965_RS23310 (OG965_23255) disA 5227632..5228756 (-) 1125 WP_371654017.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG965_RS23315 (OG965_23260) radA/sms 5228793..5230202 (-) 1410 WP_371654018.1 DNA repair protein RadA Machinery gene
  OG965_RS23320 (OG965_23265) - 5230401..5232131 (+) 1731 WP_371654019.1 hypothetical protein -
  OG965_RS23325 (OG965_23270) - 5232152..5232964 (-) 813 WP_371654020.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40335.18 Da        Isoelectric Point: 5.1161

>NTDB_id=653868 OG965_RS23310 WP_371654017.1 5227632..5228756(-) (disA) [Streptomyces sp. NBC_00224]
MAANDRAAGSGKSGTGSGNEVLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKTVDSMCTGGFVLDVEFAATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDAGIPTEETGTRHRTADRVSKQCNYPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVPEALTELNELTHAELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=653868 OG965_RS23310 WP_371654017.1 5227632..5228756(-) (disA) [Streptomyces sp. NBC_00224]
GTGGCAGCCAACGACCGGGCAGCGGGATCCGGCAAGTCCGGCACAGGCTCCGGCAACGAAGTACTGATGCGTGCCGCGCT
GAGCGCCGTCGCGCCCGGAACCGCACTCCGCGACGGCCTGGAGCGCATCCTCCGGGGCAACACGGGCGGCCTGATCGTCC
TCGGCCTCGACAAGACGGTCGACTCGATGTGTACGGGCGGCTTCGTCCTGGACGTCGAGTTCGCCGCGACGCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTGGTCCTGGACAAGGACATCACCAAGATCCACCGGGCCGGGGTGCAGCTGGTCCC
CGACGCGGGCATCCCCACGGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTACCCGG
TCGTCTCGGTCTCCCAGTCCATGCGCCTGATCGCGCTGTACGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTCTCGCGCGCGAACCAGGCGCTGGCGACGCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTGGCAGGCACGCTCTC
CGCCCTCGAAATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGGCCCAGCGCCTGGAGATGGTGAGACGTATCG
CCACGGAAATCGCCGAGTACGTGGTGGAGTTGGGCACGGACGGCCGGCTGCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTCGAGCCCGAGCGCGAGCTGGTGGTCCGGGACTACGTGCCCGAGCCCACGGCGAAGCGCTCGCGCACGGTGCCGGA
AGCGCTGACGGAGCTGAACGAACTCACCCACGCGGAGCTCCTGGAACTCCCCATAGTGGCGCGGGCGTTGGGCTACAGCG
GCTCCCCCGAGACGCTGGACTCCGCGGTCTCCCCCCGCGGCTACCGCCTCCTGGCAAAGGTCCCCCGCCTCCCCGGCGCG
ATCATCGAACGCCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCCGCGTCGGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGCGCACGGAGCGTCCGCGAGGGGCTGTCGCGGTTGGCGGAGTCGTCGATCCTGGAGCGATACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436