Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OG537_RS24285 Genome accession   NZ_CP108102
Coordinates   5514204..5515262 (-) Length   352 a.a.
NCBI ID   WP_328834341.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00228     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5509204..5520262
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG537_RS24260 (OG537_24240) cseB 5509635..5510342 (-) 708 WP_328830754.1 two-component system response regulator CseB -
  OG537_RS24265 (OG537_24245) - 5510488..5511081 (-) 594 WP_328834340.1 hypothetical protein -
  OG537_RS24270 (OG537_24250) - 5511165..5511704 (-) 540 WP_019064956.1 SigE family RNA polymerase sigma factor -
  OG537_RS24275 (OG537_24255) - 5512005..5512946 (-) 942 WP_328933565.1 A/G-specific adenine glycosylase -
  OG537_RS24280 (OG537_24260) - 5513329..5514159 (+) 831 WP_328933566.1 hypothetical protein -
  OG537_RS24285 (OG537_24265) disA 5514204..5515262 (-) 1059 WP_328834341.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG537_RS24290 (OG537_24270) radA/sms 5515400..5516809 (-) 1410 WP_266769766.1 DNA repair protein RadA Machinery gene
  OG537_RS24295 (OG537_24275) - 5517008..5518705 (+) 1698 WP_328933567.1 hypothetical protein -
  OG537_RS24300 (OG537_24280) - 5518709..5519566 (-) 858 WP_328933568.1 hypothetical protein -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 38034.67 Da        Isoelectric Point: 4.7751

>NTDB_id=653776 OG537_RS24285 WP_328834341.1 5514204..5515262(-) (disA) [Streptomyces sp. NBC_00228]
MRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFILDVEFTATRLRELCKLDGGIVVSSDLSKILRAG
VQLVPDPDIPTEETGTRHRTADRVSKQVAFPVVSVSQSMRLIALYVDGQRRVLEDSAAILSRANQALATLERYKLRLDEV
AGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVVELGTDGRLLALQLEELIAGVEPERELVVRDYVPEPTAKRS
RTVDEALAELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAIIDRLVEHFGGLQKLLAASVDD
LQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=653776 OG537_RS24285 WP_328834341.1 5514204..5515262(-) (disA) [Streptomyces sp. NBC_00228]
ATGCGCGCCTCACTGAGCGCCGTGGCCCCCGGCACGGCGTTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACGGG
CGGCCTCATCGTGCTCGGTTCCGACAAGACCGTCGAAGCGATGTGCACGGGCGGCTTCATCCTGGACGTCGAGTTCACGG
CCACGCGCCTGCGCGAACTGTGCAAGCTCGACGGCGGCATCGTGGTGTCGTCCGATCTCTCCAAGATCCTCCGGGCGGGT
GTCCAGCTGGTCCCCGACCCGGACATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGCGTCAGCAAACA
GGTCGCCTTCCCGGTGGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCCAGCGACGCGTCCTGG
AGGACTCGGCGGCGATCCTGTCCCGCGCCAACCAGGCCCTGGCGACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTG
GCGGGAACGTTGTCAGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGTCCAGCGGCTGGAGAT
GGTCCGGCTGATCGCCACCGAAATCGCCGAGTACGTAGTGGAGTTGGGCACGGACGGCCGCCTGCTCGCCCTCCAGCTGG
AGGAGTTGATCGCGGGCGTGGAGCCGGAGCGCGAACTCGTCGTACGCGACTACGTCCCCGAGCCCACGGCCAAACGATCC
CGCACGGTGGACGAGGCACTCGCCGAACTCGACGCCCTCTCCCACGCGGAGCTCCTCGAACTCCCCACCGTGGCCCGCGC
GTTGGGCTACACCGGCTCCCCCGAGGCCCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTGCTGGCCAAGGTCCCGC
GCCTCCCCGGCGCGATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTGCAGAAACTCCTGGCGGCAAGCGTCGACGAC
CTGCAGACGGTCGACGGCGTGGGCGAAGCGCGGGCCCGCAGCGTCCGAGAGGGCCTCTCCCGCCTGGCGGAGTCCTCGAT
CCTCGAACGCTACGTCTGA

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(133-275)

Helix-hairpin-helix motif (HHH_2)

(302-337)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(16-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.665

98.295

0.449