Detailed information NTG0653769

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: L7F76_RS21515
• Genome accession: NZ_CP091813
• Coordinates: 4321747..4322547 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain 10MC160002271
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4316747..4327547

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L7F76_RS21480 (L7F76_21445)	gspH	4316903..4317418 (+)	516	WP_062920974.1	type II secretion system minor pseudopilin GspH	-
L7F76_RS21485 (L7F76_21450)	gspI	4317415..4317780 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
L7F76_RS21490 (L7F76_21455)	gspJ	4317777..4318373 (+)	597	WP_062920975.1	type II secretion system minor pseudopilin GspJ	-
L7F76_RS21495 (L7F76_21460)	gspK	4318370..4319356 (+)	987	WP_077265688.1	type II secretion system minor pseudopilin GspK	-
L7F76_RS21500 (L7F76_21465)	gspL	4319343..4320536 (+)	1194	WP_004191957.1	type II secretion system protein GspL	-
L7F76_RS21505 (L7F76_21470)	-	4320529..4321014 (+)	486	WP_062920976.1	type II secretion system protein M	-
L7F76_RS21510 (L7F76_21475)	-	4321004..4321750 (+)	747	WP_004145897.1	type II secretion system protein N	-
L7F76_RS21515 (L7F76_21480)	pilD	4321747..4322547 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
L7F76_RS21520 (L7F76_21485)	hrpB	4322595..4325024 (-)	2430	WP_062920977.1	ATP-dependent helicase HrpB	-
L7F76_RS21525 (L7F76_21490)	thpR	4325097..4325633 (+)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
L7F76_RS21530 (L7F76_21495)	sfsA	4325633..4326349 (+)	717	WP_002888848.1	DNA/RNA nuclease SfsA	-
L7F76_RS21535 (L7F76_21500)	dksA	4326512..4326967 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=653769 L7F76_RS21515 WP_004145898.1 4321747..4322547(+) (pilD) [Klebsiella pneumoniae strain 10MC160002271]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=653769 L7F76_RS21515 WP_004145898.1 4321747..4322547(+) (pilD) [Klebsiella pneumoniae strain 10MC160002271]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTGCTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425