Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | SUTH_RS16515 | Genome accession | NZ_AP012547 |
| Coordinates | 3473765..3474769 (+) | Length | 334 a.a. |
| NCBI ID | WP_041100807.1 | Uniprot ID | W0SMP8 |
| Organism | Sulfuritalea hydrogenivorans sk43H strain DSM 22779 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3468765..3479769
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SUTH_RS16490 (SUTH_03313) | - | 3469586..3469837 (-) | 252 | WP_041100799.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| SUTH_RS16495 (SUTH_03314) | coaD | 3469869..3470360 (-) | 492 | WP_041100801.1 | pantetheine-phosphate adenylyltransferase | - |
| SUTH_RS16500 (SUTH_03315) | rsmD | 3470357..3470890 (-) | 534 | WP_041100803.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| SUTH_RS16505 (SUTH_03316) | - | 3471012..3472301 (-) | 1290 | WP_084207463.1 | pitrilysin family protein | - |
| SUTH_RS16510 (SUTH_03317) | - | 3472301..3473665 (-) | 1365 | WP_041100805.1 | pitrilysin family protein | - |
| SUTH_RS16515 (SUTH_03318) | pilA | 3473765..3474769 (+) | 1005 | WP_041100807.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| SUTH_RS16520 (SUTH_03319) | - | 3474766..3475413 (+) | 648 | WP_041100809.1 | cell division ATP-binding protein FtsE | - |
| SUTH_RS16525 (SUTH_03320) | ftsX | 3475410..3476309 (+) | 900 | WP_041100810.1 | permease-like cell division protein FtsX | - |
| SUTH_RS19150 (SUTH_03321) | - | 3476510..3476893 (+) | 384 | WP_231851058.1 | hypothetical protein | - |
| SUTH_RS16535 (SUTH_03322) | rpoH | 3477090..3477986 (+) | 897 | WP_041100814.1 | RNA polymerase sigma factor RpoH | - |
| SUTH_RS16540 (SUTH_03323) | - | 3478055..3478630 (-) | 576 | WP_041100815.1 | SCO family protein | - |
| SUTH_RS16545 (SUTH_03324) | cyoE | 3478639..3479538 (-) | 900 | WP_041100817.1 | heme o synthase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 35338.44 Da Isoelectric Point: 7.4818
>NTDB_id=65363 SUTH_RS16515 WP_041100807.1 3473765..3474769(+) (pilA) [Sulfuritalea hydrogenivorans sk43H strain DSM 22779]
MFGFLKTKDDPAAPSAAATAARAPWSERLKAGLSRTRETLNTPLTELFSRAKIDDDLLDDLETTLLTADCGVDATHWLLA
ELKATVKRDRLETPAQLRSALTQGLRTLLAPLEQPLQAEGHQPFVIMIAGVNGAGKTTSIGKLAKHFQSQGKSVLLAAGD
TFRAAAREQLTAWGERNGVTVIAQESGDPAAVVFDAIHAARARKIDVVLADTAGRLPTQLHLMEEIAKVRRVIQKAHDTG
PHEVLLVLDANIGQNAVQQVKAFDKAIGVTGLVITKLDGTAKGGVLAAIARQCPKPVRFIGVGEGIDDLQAFRTGEFVEA
LLGPSSGSSPGASS
MFGFLKTKDDPAAPSAAATAARAPWSERLKAGLSRTRETLNTPLTELFSRAKIDDDLLDDLETTLLTADCGVDATHWLLA
ELKATVKRDRLETPAQLRSALTQGLRTLLAPLEQPLQAEGHQPFVIMIAGVNGAGKTTSIGKLAKHFQSQGKSVLLAAGD
TFRAAAREQLTAWGERNGVTVIAQESGDPAAVVFDAIHAARARKIDVVLADTAGRLPTQLHLMEEIAKVRRVIQKAHDTG
PHEVLLVLDANIGQNAVQQVKAFDKAIGVTGLVITKLDGTAKGGVLAAIARQCPKPVRFIGVGEGIDDLQAFRTGEFVEA
LLGPSSGSSPGASS
Nucleotide
Download Length: 1005 bp
>NTDB_id=65363 SUTH_RS16515 WP_041100807.1 3473765..3474769(+) (pilA) [Sulfuritalea hydrogenivorans sk43H strain DSM 22779]
ATGTTTGGTTTCCTGAAAACAAAGGACGATCCCGCAGCGCCGTCGGCAGCGGCGACAGCGGCACGCGCTCCATGGAGCGA
ACGCCTCAAGGCCGGCCTTTCGCGCACCCGTGAAACCCTCAACACGCCGCTGACGGAACTCTTCAGCCGGGCGAAGATCG
ACGACGATCTGCTCGATGATCTGGAAACCACGCTGCTGACGGCGGATTGCGGCGTCGACGCCACGCACTGGCTGCTGGCT
GAGCTCAAGGCCACCGTCAAGCGCGACAGGCTGGAAACCCCGGCCCAGCTGCGATCGGCCCTGACGCAGGGGCTGCGCAC
GCTGCTCGCCCCGCTGGAGCAACCACTGCAAGCCGAAGGCCATCAGCCCTTCGTCATCATGATCGCGGGCGTCAATGGCG
CCGGCAAGACCACCTCGATCGGCAAGCTGGCCAAACATTTCCAGAGCCAGGGCAAGAGCGTCCTGCTCGCCGCCGGCGAC
ACCTTCCGCGCCGCGGCGCGCGAGCAACTGACGGCCTGGGGCGAACGAAACGGCGTTACCGTCATCGCCCAGGAATCCGG
CGATCCGGCGGCGGTGGTGTTCGACGCCATCCATGCCGCCCGCGCCCGCAAGATCGACGTGGTACTGGCCGACACCGCGG
GACGTCTGCCGACGCAGCTGCACCTGATGGAAGAAATCGCCAAGGTGCGCCGCGTGATCCAGAAGGCCCATGACACCGGG
CCGCACGAAGTGCTGCTGGTGCTCGACGCCAACATCGGCCAGAACGCCGTGCAGCAGGTCAAGGCCTTCGACAAGGCGAT
CGGCGTCACCGGGCTGGTGATCACCAAACTCGACGGCACTGCCAAGGGCGGCGTGCTCGCCGCCATCGCCCGTCAGTGTC
CGAAACCGGTGCGCTTCATCGGCGTCGGCGAGGGCATCGACGACCTGCAGGCCTTCCGCACCGGGGAATTCGTCGAAGCG
CTGCTGGGACCCTCATCGGGTTCCTCGCCGGGTGCTTCCTCTTGA
ATGTTTGGTTTCCTGAAAACAAAGGACGATCCCGCAGCGCCGTCGGCAGCGGCGACAGCGGCACGCGCTCCATGGAGCGA
ACGCCTCAAGGCCGGCCTTTCGCGCACCCGTGAAACCCTCAACACGCCGCTGACGGAACTCTTCAGCCGGGCGAAGATCG
ACGACGATCTGCTCGATGATCTGGAAACCACGCTGCTGACGGCGGATTGCGGCGTCGACGCCACGCACTGGCTGCTGGCT
GAGCTCAAGGCCACCGTCAAGCGCGACAGGCTGGAAACCCCGGCCCAGCTGCGATCGGCCCTGACGCAGGGGCTGCGCAC
GCTGCTCGCCCCGCTGGAGCAACCACTGCAAGCCGAAGGCCATCAGCCCTTCGTCATCATGATCGCGGGCGTCAATGGCG
CCGGCAAGACCACCTCGATCGGCAAGCTGGCCAAACATTTCCAGAGCCAGGGCAAGAGCGTCCTGCTCGCCGCCGGCGAC
ACCTTCCGCGCCGCGGCGCGCGAGCAACTGACGGCCTGGGGCGAACGAAACGGCGTTACCGTCATCGCCCAGGAATCCGG
CGATCCGGCGGCGGTGGTGTTCGACGCCATCCATGCCGCCCGCGCCCGCAAGATCGACGTGGTACTGGCCGACACCGCGG
GACGTCTGCCGACGCAGCTGCACCTGATGGAAGAAATCGCCAAGGTGCGCCGCGTGATCCAGAAGGCCCATGACACCGGG
CCGCACGAAGTGCTGCTGGTGCTCGACGCCAACATCGGCCAGAACGCCGTGCAGCAGGTCAAGGCCTTCGACAAGGCGAT
CGGCGTCACCGGGCTGGTGATCACCAAACTCGACGGCACTGCCAAGGGCGGCGTGCTCGCCGCCATCGCCCGTCAGTGTC
CGAAACCGGTGCGCTTCATCGGCGTCGGCGAGGGCATCGACGACCTGCAGGCCTTCCGCACCGGGGAATTCGTCGAAGCG
CTGCTGGGACCCTCATCGGGTTCCTCGCCGGGTGCTTCCTCTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
63.211 |
89.521 |
0.566 |