Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHT59_RS20675 Genome accession   NZ_CP108094
Coordinates   4688336..4689460 (+) Length   374 a.a.
NCBI ID   WP_266830670.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00243     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4683336..4694460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT59_RS20660 (OHT59_20665) - 4684036..4684749 (+) 714 WP_266463896.1 hypothetical protein -
  OHT59_RS20665 (OHT59_20670) - 4684782..4686647 (-) 1866 WP_326721491.1 hypothetical protein -
  OHT59_RS20670 (OHT59_20675) radA/sms 4686855..4688264 (+) 1410 WP_326721492.1 DNA repair protein RadA Machinery gene
  OHT59_RS20675 (OHT59_20680) disA 4688336..4689460 (+) 1125 WP_266830670.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHT59_RS20680 (OHT59_20685) - 4689562..4690383 (-) 822 WP_326721493.1 hypothetical protein -
  OHT59_RS20685 (OHT59_20690) - 4690717..4691631 (+) 915 WP_326721494.1 A/G-specific adenine glycosylase -
  OHT59_RS20690 (OHT59_20695) - 4691876..4692427 (+) 552 WP_266456951.1 SigE family RNA polymerase sigma factor -
  OHT59_RS20695 (OHT59_20700) - 4692565..4693164 (+) 600 WP_326721495.1 hypothetical protein -
  OHT59_RS20700 (OHT59_20705) cseB 4693204..4693920 (+) 717 WP_326721496.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40147.92 Da        Isoelectric Point: 5.0095

>NTDB_id=653438 OHT59_RS20675 WP_266830670.1 4688336..4689460(+) (disA) [Streptomyces sp. NBC_00243]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELHALTHAELLELPTVARALGYTGSPEALDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=653438 OHT59_RS20675 WP_266830670.1 4688336..4689460(+) (disA) [Streptomyces sp. NBC_00243]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGGTCAGACAAGACCGTCGAGGCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACGCGACTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGACCATCCCGACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGACTTCACGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCCAGCGCCGCGTCCTCGAAGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACCCTGTC
GGCCCTCGAGATCGAGGACCTGGTCACGGTCCGCGACGTCTCGGCGGTGGCCCAGCGACTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGGCGCCTTCTCGCGCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAGCCCGAGCGTGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGAGCTCCACGCGCTCACCCACGCCGAGCTGCTCGAACTCCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTACCGTCTCCTCGCCAAGGTGCCCCGCCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGTCTGTCGCGACTGGCGGAGTCTTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433