Detailed information NTG0653214

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT77_RS29475
• Genome accession: NZ_CP108087
• Coordinates: 6652865..6654151 (+)
• Length: 428 a.a.
• NCBI ID: WP_266768669.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00252
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6647865..6659151

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT77_RS29445 (OHT77_29450)	-	6648936..6649130 (+)	195	WP_026178055.1	hypothetical protein	-
OHT77_RS29460 (OHT77_29465)	tig	6649732..6651117 (+)	1386	WP_328831437.1	trigger factor	-
OHT77_RS29465 (OHT77_29470)	clpP	6651372..6651974 (+)	603	WP_033285987.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT77_RS29470 (OHT77_29475)	clpP	6652024..6652704 (+)	681	WP_328831439.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT77_RS29475 (OHT77_29480)	clpX	6652865..6654151 (+)	1287	WP_266768669.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT77_RS29480 (OHT77_29485)	-	6654231..6655238 (-)	1008	WP_328831440.1	hypothetical protein	-
OHT77_RS29485 (OHT77_29490)	-	6655375..6657999 (+)	2625	WP_328831441.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46841.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=653214 OHT77_RS29475 WP_266768669.1 6652865..6654151(+) (clpX) [Streptomyces sp. NBC_00252]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELQSKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=653214 OHT77_RS29475 WP_266768669.1 6652865..6654151(+) (clpX) [Streptomyces sp. NBC_00252]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGCCAGGAGTCG
GCGAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTTCAGGCCGGTGAGAACGGCGGCGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGAGCGGAGAAGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGCCGGAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACCATCCGCTCGAAGCGGGAGCTGCAGTCGAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGGCGGCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGACTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTGGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCACGCGGCCGGGGCCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516