Detailed information NTG0652873

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG766_RS02015
• Genome accession: NZ_CP108080
• Coordinates: 417948..419228 (+)
• Length: 426 a.a.
• NCBI ID: WP_328724387.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00259
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 412948..424228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG766_RS02005 (OG766_02005)	-	414856..416688 (+)	1833	WP_328724385.1	SpoIIE family protein phosphatase	-
OG766_RS02010 (OG766_02010)	-	416739..417851 (-)	1113	WP_328724386.1	helix-turn-helix domain-containing protein	-
OG766_RS02015 (OG766_02015)	clpX	417948..419228 (+)	1281	WP_328724387.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG766_RS02020 (OG766_02020)	-	419478..420665 (+)	1188	WP_328724388.1	hypothetical protein	-
OG766_RS02025 (OG766_02025)	-	420735..423029 (-)	2295	WP_328724389.1	FtsX-like permease family protein	-
OG766_RS02030 (OG766_02030)	-	423033..423815 (-)	783	WP_328724390.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46438.25 Da
• Isoelectric Point: 4.7736

>NTDB_id=652873 OG766_RS02015 WP_328724387.1 417948..419228(+) (clpX) [Streptomyces sp. NBC_00259]
MARIGDEGSLLKCSFCGKSQKQVRKLIAGPAAIHICDECVELCNELIEEELADVTETPLVELPKPAEIHRFLDEYVIGQE
AAKRSLAVAVYNHYKRVRDKEDGDDPVEVAKSNILLLGPTGCGKTYLAQTLARLLKVPFAIADATALTEAGYVGEDVENI
LLKLLQAADYDVERAETGIIYIDEIDKIARKSENLSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQIDTA
NVLFIVAGAFAGLETIIDDRVGRRGLGFAAQVGPGDGDSGGTDDGDVFARVMPADLIRFGLIPEFIGRLPVIARVSKLDK
AALLKTLTEPRNALVKQYQRLFEMDNVELEFSDGALEAIVEKSVLRGTGARGLRGIMEHVLRPVMYEIPSREDVVKVVIG
EHTVREYAGPLVVTRRPPEQLGDQPA

Nucleotide

• Length: 1281 bp

>NTDB_id=652873 OG766_RS02015 WP_328724387.1 417948..419228(+) (clpX) [Streptomyces sp. NBC_00259]
ATGGCACGCATCGGTGACGAGGGCTCACTGCTGAAGTGTTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAGGAAGCTCAT
CGCCGGGCCCGCCGCCATCCACATCTGCGACGAGTGCGTCGAGCTCTGCAACGAGCTGATCGAGGAGGAGCTGGCGGATG
TCACCGAGACCCCGCTCGTCGAACTGCCCAAGCCGGCGGAGATCCACCGCTTCCTCGACGAGTACGTCATCGGCCAGGAG
GCGGCGAAGCGGTCCCTGGCCGTGGCCGTGTACAACCACTACAAGCGGGTCCGCGACAAGGAGGACGGGGACGATCCCGT
CGAGGTGGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTGCGGCAAGACCTATCTGGCGCAGACCCTGGCGCGGC
TGCTGAAGGTGCCGTTCGCCATCGCCGATGCCACCGCGCTCACCGAGGCCGGATATGTCGGCGAGGACGTGGAGAACATC
CTGCTGAAGCTGCTCCAGGCCGCCGACTACGACGTGGAGCGCGCCGAGACCGGCATCATCTACATCGACGAGATCGACAA
GATCGCGCGCAAGAGCGAGAACCTGTCGATCACGCGCGATGTGTCCGGCGAGGGTGTGCAGCAGGCCCTGCTGAAGATCC
TTGAGGGCACGACCGCCTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAGATCGACACGGCG
AACGTGCTGTTCATCGTGGCCGGCGCGTTCGCGGGTCTGGAGACGATCATCGACGACCGGGTGGGCCGACGCGGCCTGGG
ATTCGCCGCCCAGGTCGGGCCCGGCGACGGGGATTCGGGCGGGACCGACGACGGAGACGTGTTCGCCCGGGTGATGCCGG
CCGACCTGATCAGGTTCGGGCTCATCCCGGAGTTCATCGGCAGGCTCCCCGTCATCGCCCGGGTGTCGAAGCTCGACAAG
GCCGCCCTGCTGAAGACCCTCACCGAGCCGCGGAATGCTCTGGTCAAGCAGTACCAGCGGTTGTTCGAGATGGACAATGT
CGAGCTCGAGTTCAGCGACGGGGCGCTGGAGGCCATCGTCGAGAAGTCCGTCCTGCGCGGCACCGGCGCGCGGGGGCTGC
GGGGAATCATGGAGCACGTCCTGCGGCCCGTGATGTACGAGATCCCCAGCCGCGAGGACGTGGTCAAGGTCGTCATCGGC
GAGCACACGGTCCGGGAGTACGCCGGCCCGCTCGTCGTCACCCGCCGGCCGCCGGAGCAACTGGGGGACCAGCCGGCCTG
A

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-49)

• AAA domain (Cdc48 subfamily) (AAA_2) (111-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	61.481	95.07	0.585
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	51.825	96.479	0.5