Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA28_RS23355 Genome accession   NZ_CP108075
Coordinates   5139076..5140200 (+) Length   374 a.a.
NCBI ID   WP_116511422.1    Uniprot ID   A0ABV4SRP8
Organism   Streptomyces sp. NBC_00269     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5134076..5145200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA28_RS23340 (OHA28_23380) - 5134606..5135535 (+) 930 WP_326711794.1 hypothetical protein -
  OHA28_RS23345 (OHA28_23385) - 5135569..5137287 (-) 1719 WP_326711795.1 hypothetical protein -
  OHA28_RS23350 (OHA28_23390) radA/sms 5137554..5138963 (+) 1410 WP_116511420.1 DNA repair protein RadA Machinery gene
  OHA28_RS23355 (OHA28_23395) disA 5139076..5140200 (+) 1125 WP_116511422.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA28_RS23360 (OHA28_23400) - 5140539..5141333 (-) 795 WP_326711796.1 hypothetical protein -
  OHA28_RS23365 (OHA28_23405) - 5141519..5142160 (+) 642 WP_326711797.1 phosphatase PAP2 family protein -
  OHA28_RS23370 (OHA28_23410) - 5142161..5142625 (-) 465 WP_326716010.1 response regulator transcription factor -
  OHA28_RS23375 (OHA28_23415) - 5143424..5144320 (+) 897 WP_326711798.1 A/G-specific adenine glycosylase -
  OHA28_RS23380 (OHA28_23420) - 5144502..5145050 (+) 549 WP_116511432.1 SigE family RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40297.15 Da        Isoelectric Point: 4.9269

>NTDB_id=652740 OHA28_RS23355 WP_116511422.1 5139076..5140200(+) (disA) [Streptomyces sp. NBC_00269]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALFELDALTHAELLELPTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652740 OHA28_RS23355 WP_116511422.1 5139076..5140200(+) (disA) [Streptomyces sp. NBC_00269]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGCAAGTCCGGCGGGAGCTCCGGTGCCGATGGGCTGATGCGCGCCTCACT
GAGCGCGGTCGCGCCCGGTACGGCGCTGCGTGACGGCCTCGAGCGAATCCTCCGCGGCAACACCGGCGGACTCATCGTTC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACCGGCGGTTTCATCCTGGACGTCGAGTTCACCGCGACGCGTCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTTCGGGCGGGCGTCCAGTTGGTGCC
CGACCCCACGATCCCCACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCCG
TGGTCTCGGTGTCTCAGTCGATGCGGCTCATCGCCCTTTACGTGGACGGGCAGCGGCGCGTCCTCGAGGACTCGGCCGCG
ATTCTCTCGCGGGCGAATCAGGCGCTTGCCACTCTTGAGCGGTACAAGCTCCGCTTGGACGAGGTGGCCGGGACGCTCTC
CGCGCTCGAGATCGAGGATCTCGTGACCGTGCGGGATGTGACCGCGGTCGCGCAGCGGCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGGACGGATGGCCGACTGCTCGCCCTTCAGCTCGACGAGTTGATCGCC
GGGGTGGAGCCCGAGCGGGAGCTCGTCGTTCGGGACTATGTGCCCGAACCTACGGCCAAGCGGTCCCGGACCGTCGACGA
GGCGCTGTTCGAGCTCGACGCGCTGACACATGCCGAGCTTCTCGAACTGCCCACTGTGGCACGCGCGTTGGGGTACACCG
GGTCTCCGGAGACCCTGGACTCGGCCGTTTCGCCTCGCGGGTTCCGGCTGTTGGCGAAGGTGCCTCGGCTGCCCGGGGCC
ATCATCGACCGGCTTGTCGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCCAGCGTCGATGATCTGCAGGCCGTGGA
CGGCGTCGGGGAGGCCCGTGCCCGGAGCGTGCGGGAAGGGCTCTCGCGGTTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43