Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG386_RS20415 Genome accession   NZ_CP108067
Coordinates   4717567..4718691 (+) Length   374 a.a.
NCBI ID   WP_266603467.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00273     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4712567..4723691
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG386_RS20400 (OG386_20405) - 4712652..4713524 (+) 873 WP_328789346.1 hypothetical protein -
  OG386_RS20405 (OG386_20410) - 4713629..4715398 (-) 1770 WP_328789347.1 hypothetical protein -
  OG386_RS20410 (OG386_20415) radA/sms 4715891..4717303 (+) 1413 WP_327383940.1 DNA repair protein RadA Machinery gene
  OG386_RS20415 (OG386_20420) disA 4717567..4718691 (+) 1125 WP_266603467.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG386_RS20420 (OG386_20425) - 4718893..4719711 (-) 819 WP_328789348.1 hypothetical protein -
  OG386_RS20425 (OG386_20430) - 4719872..4720498 (+) 627 WP_328789349.1 phosphatase PAP2 family protein -
  OG386_RS20430 (OG386_20435) - 4720522..4721499 (+) 978 WP_328789350.1 A/G-specific adenine glycosylase -
  OG386_RS20435 (OG386_20440) - 4721684..4722244 (+) 561 WP_327383944.1 SigE family RNA polymerase sigma factor -
  OG386_RS20440 (OG386_20445) - 4722280..4722912 (+) 633 WP_327383946.1 hypothetical protein -
  OG386_RS20445 (OG386_20450) cseB 4722942..4723655 (+) 714 WP_328789351.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40406.37 Da        Isoelectric Point: 4.9472

>NTDB_id=652475 OG386_RS20415 WP_266603467.1 4717567..4718691(+) (disA) [Streptomyces sp. NBC_00273]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDALTHPELLELPIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652475 OG386_RS20415 WP_266603467.1 4717567..4718691(+) (disA) [Streptomyces sp. NBC_00273]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGAAAGTCGGGTGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCTTGGAGCGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGTATGGACAAGAGCGTCGAGGCGATGTGCACCGGCGGCTTCGTCCTGGACGTGGAGTTCACCGCGACCAGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTTCC
GGACGCGTCGATCCCGACGGAGGAGACGGGCACGCGCCACCGTACGGCCGACCGCGTCTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCGCTGCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTGGTCATCCGGGACTACGTGCCGGAACCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCGGAGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAGCTGCCGATCGTGGCGCGGGCCCTGGGGTACACGG
GCTCGCCGGAGACGCTGGACTCTGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTGCAGACGGTGGA
CGGGGTGGGCGAGGCCCGTGCGCGGAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCGTCCATCCTGGAGCGATACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444