Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG960_RS20295 Genome accession   NZ_CP108059
Coordinates   4611317..4612441 (+) Length   374 a.a.
NCBI ID   WP_327695548.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00280     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4606317..4617441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG960_RS20280 (OG960_20330) - 4606923..4607789 (+) 867 WP_371660585.1 hypothetical protein -
  OG960_RS20285 (OG960_20335) - 4607806..4609608 (-) 1803 WP_371660586.1 hypothetical protein -
  OG960_RS20290 (OG960_20340) radA/sms 4609826..4611235 (+) 1410 WP_371660587.1 DNA repair protein RadA Machinery gene
  OG960_RS20295 (OG960_20345) disA 4611317..4612441 (+) 1125 WP_327695548.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG960_RS20300 (OG960_20350) - 4612548..4613396 (-) 849 WP_371660588.1 hypothetical protein -
  OG960_RS20305 (OG960_20355) - 4613781..4614722 (+) 942 WP_371660589.1 A/G-specific adenine glycosylase -
  OG960_RS20310 (OG960_20360) - 4615018..4615560 (+) 543 WP_006374267.1 SigE family RNA polymerase sigma factor -
  OG960_RS20315 (OG960_20365) - 4615722..4616369 (+) 648 WP_371660590.1 hypothetical protein -
  OG960_RS20320 (OG960_20370) cseB 4616443..4617150 (+) 708 WP_371660591.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39978.73 Da        Isoelectric Point: 4.9130

>NTDB_id=652374 OG960_RS20295 WP_327695548.1 4611317..4612441(+) (disA) [Streptomyces sp. NBC_00280]
MAANDRAAAPGKYGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFSATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPNIPTEETGTRHRTADRVSKQVAYSVISVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAGYVLELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDALSHAELLELSTVAKALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652374 OG960_RS20295 WP_327695548.1 4611317..4612441(+) (disA) [Streptomyces sp. NBC_00280]
GTGGCAGCCAACGACCGGGCAGCAGCTCCAGGAAAGTACGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCGCTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TGGGCTCCGACAAGACCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCTCGGCGACGCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGGACCTGTCCAAGATCCTGCGGGCCGGCGTCCAACTGGTCCC
CGACCCGAACATCCCCACCGAGGAGACGGGCACCCGGCACCGCACCGCCGACCGCGTGTCGAAGCAGGTGGCCTACTCGG
TCATCTCCGTCTCCCAGTCCATGAGACTCATCGCGCTGTACGTGGACGGCCAGCGCCGGGTCCTGGAGGACTCTGCCGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTAGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGTGCAGCGCCTGGAGATGGTCCGCCTCATCG
CGACGGAAATCGCCGGGTACGTGCTCGAACTGGGCACCGACGGGCGGCTTCTGGCTCTCCAGCTGGAGGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCACTCGCCGAACTCGACGCGCTCAGCCACGCCGAACTGCTCGAACTCTCCACGGTGGCCAAGGCCCTGGGCTACACCG
GCTCACCCGAGACGCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGTCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGAGGGCGCGCAGCGTGCGGGAAGGTCTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAGCGTTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433