Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHT57_RS28665 Genome accession   NZ_CP108055
Coordinates   6178674..6179798 (-) Length   374 a.a.
NCBI ID   WP_328749420.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00285     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6173674..6184798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT57_RS28640 (OHT57_28665) cseB 6174206..6174910 (-) 705 WP_328749415.1 two-component system response regulator CseB -
  OHT57_RS28645 (OHT57_28670) - 6174997..6175680 (-) 684 WP_328749416.1 hypothetical protein -
  OHT57_RS28650 (OHT57_28675) - 6175665..6176207 (-) 543 WP_328749417.1 SigE family RNA polymerase sigma factor -
  OHT57_RS28655 (OHT57_28680) - 6176445..6177380 (-) 936 WP_328749418.1 A/G-specific adenine glycosylase -
  OHT57_RS28660 (OHT57_28685) - 6177728..6178573 (+) 846 WP_328749419.1 hypothetical protein -
  OHT57_RS28665 (OHT57_28690) disA 6178674..6179798 (-) 1125 WP_328749420.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHT57_RS28670 (OHT57_28695) radA/sms 6179880..6181289 (-) 1410 WP_328749421.1 DNA repair protein RadA Machinery gene
  OHT57_RS28675 (OHT57_28700) - 6181496..6183187 (+) 1692 WP_328749422.1 hypothetical protein -
  OHT57_RS28680 (OHT57_28705) - 6183262..6184056 (-) 795 WP_328753354.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40226.99 Da        Isoelectric Point: 4.9955

>NTDB_id=652300 OHT57_RS28665 WP_328749420.1 6178674..6179798(-) (disA) [Streptomyces sp. NBC_00285]
MAANDRAAAPGKSGGSAGSDGLMRASLSAVAPGTAMRDGLERVLRGNTGGLIILGWDKTVETMCTGGFVLDVEFAATRLR
ELCKLDGGIVLSSDLSKILRAGVQFVPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDQALYELDALTHAELLELPTVARALGYTGSPEAIDSGVSPRGFRLLAKVPRLPGA
IIDRLVEHFGSLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652300 OHT57_RS28665 WP_328749420.1 6178674..6179798(-) (disA) [Streptomyces sp. NBC_00285]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGCGCCTCCCT
GAGCGCCGTGGCCCCCGGCACCGCCATGCGCGACGGCCTTGAGAGGGTGCTGCGCGGCAACACCGGCGGACTCATCATTC
TCGGCTGGGACAAGACGGTGGAGACGATGTGCACGGGCGGTTTCGTGCTGGATGTCGAGTTCGCCGCGACCCGTCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCTCGTCGGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCGTGCC
TGACGCGACGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCGAAGCAGGTCGGCTTCCCGG
TCGTCTCCGTCTCCCAGTCCATGCGTCTGATCGCCCTCTACGTCGACGGGCAGCGCCGGGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCGAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACCCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCCGTGGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACGGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGCCGCCTGCTCACCCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAACGCGAACTGGTGGTCCGGGACTACGTCCCCGAGCCCACCGCGAAGCGTTCCCGCACGGTCGACCA
GGCGCTGTACGAACTGGACGCCCTGACCCACGCCGAGCTCCTGGAACTGCCCACGGTGGCCCGCGCGTTGGGCTACACCG
GCTCCCCCGAGGCGATCGACTCGGGCGTGTCCCCGCGGGGCTTCCGCCTGCTGGCCAAGGTGCCGCGCCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCAGCCTCCAGAAACTCCTCGCGGCGAGCGTGGACGATCTGCAGACGGTCGA
CGGCGTGGGCGAGGCAAGGGCGCGCAGCGTCCGGGAGGGCCTGTCCAGGCTGGCGGAGAGCTCGATCCTGGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.954

92.513

0.425