Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   L3503_RS00135 Genome accession   NZ_CP091528
Coordinates   22486..23763 (+) Length   425 a.a.
NCBI ID   WP_021730799.1    Uniprot ID   -
Organism   Lactiplantibacillus paraplantarum strain KCCM 11826P     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 17486..28763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3503_RS00110 (L3503_00110) tsf 18383..19261 (+) 879 WP_021730794.1 translation elongation factor Ts -
  L3503_RS00115 (L3503_00115) pyrH 19461..20183 (+) 723 WP_021730795.1 UMP kinase -
  L3503_RS00120 (L3503_00120) frr 20185..20748 (+) 564 WP_021730796.1 ribosome recycling factor -
  L3503_RS00125 (L3503_00125) - 20868..21647 (+) 780 WP_021730797.1 isoprenyl transferase -
  L3503_RS00130 (L3503_00130) - 21663..22448 (+) 786 WP_021730798.1 phosphatidate cytidylyltransferase -
  L3503_RS00135 (L3503_00135) eeP 22486..23763 (+) 1278 WP_021730799.1 RIP metalloprotease RseP Regulator
  L3503_RS00140 (L3503_00140) - 23803..25512 (+) 1710 WP_021730800.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45969.55 Da        Isoelectric Point: 9.9189

>NTDB_id=652191 L3503_RS00135 WP_021730799.1 22486..23763(+) (eeP) [Lactiplantibacillus paraplantarum strain KCCM 11826P]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQVGQDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDETEVKRYSVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTAHSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQQLKLTIKRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=652191 L3503_RS00135 WP_021730799.1 22486..23763(+) (eeP) [Lactiplantibacillus paraplantarum strain KCCM 11826P]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGTATCTTGGTCATCGTCCATGAGTTTGGGCACTTTTACTTCGC
CAAAAAGGCTGGAATTTTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCCACGA
CCTATACGTTACGGTTTTTACCAATTGGGGGCTACGTGCGGATGGCAGGTGTCGCCGATGATGAGGATGAAGAACTCAAA
CCAGGGACACCAGTAAGCTTGCAAGTCGGTCAGGATGGGATTGTTCATTCGATCAATGCTAGTAAAAAAACAACGTTGTT
CAATGGAATTCCGCTATCGGTAACGGCCACTGATCTAGAAAAAGAACTCTGGATCGAAGGTTACGAAAATGGTGACGAAA
CTGAAGTGAAACGATATTCTGTCGATCATGATGCGACCATTGTGGAAAGTGACGGGACTGAAGTTCAAATTGCCCCGGTC
GACGTTCAGTTTCAATCGGCCAAACTTTGGCAACGTATGTTGACCAATTTTGCTGGTCCGATGAATAATTTCATTCTGGC
CATCATTACCTTTGCCATTTTAGCTTTTATGCAAGGGGGGGTCACCAGTACGACGACCCACGTTGCAGCGACAACGGCTC
ACTCAGTCGCACGACAAGCTGGCATTCAAAAGGGTGATCAGATTGTGGCCGTAAATGGTAAAAAAATGACGAGTGCGCAA
TCAATTTCGTTATTGATTCAGGACAGCCCCAAGCAACAATTAAAGTTGACCATCAAACGGGCGGGACAGACTAAAAAAAT
TGCAGTCACGCCCGCTGCAAAGACGGTTTCTGGTAATCGAATCGGTCAAATTGGGGTCCAATGGGCCACTAAGACGGATA
CGAGTCTAGGTGCTAAGTTGGCATATGGGTTTACTGGCTCGTGGGGAATCACGAAGCAGATTTTTCAAGTGCTCGGGCGG
ATGGTTACCCATGGTTTTAGTTTGAATGATTTAGGGGGGCCCGTGGCAATCTTTGCAACGACTTCTCAAGCGGCTAAATC
TGGTGTGCGCACTGTGATTTACTTGCTGGCTGTGTTATCGATCAACCTCGGAATTGTCAATTTATTGCCAATTCCAGCCC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGAGGTAAGCCACTACGAGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGATTTGGCCTTTTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAACGGTATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(211-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494