Detailed information NTG0065216

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BEST7003_RS02120
• Genome accession: NZ_AP012496
• Coordinates: 428827..429975 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis BEST7003
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 423827..434975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEST7003_RS02100 (BEST7003_0374)	yclH	424204..424884 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
BEST7003_RS02105 (BEST7003_0375)	yclI	424900..426360 (-)	1461	WP_003234506.1	ABC transporter permease	-
BEST7003_RS02110 (BEST7003_0376)	yclJ	426573..427256 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
BEST7003_RS02115 (BEST7003_0377)	yclK	427243..428664 (+)	1422	WP_009969263.1	two-component system sensor histidine kinase YclK	-
BEST7003_RS02120 (BEST7003_0378)	rapC	428827..429975 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
BEST7003_RS02125 (BEST7003_0379)	phrC	429959..430081 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
BEST7003_RS21235	yczM	430181..430270 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
BEST7003_RS20290	yczN	430352..430465 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
BEST7003_RS02140 (BEST7003_0380)	thrD	430619..431983 (-)	1365	WP_009966541.1	aspartate kinase	-
BEST7003_RS02145 (BEST7003_0381)	ceuB	432368..433318 (+)	951	WP_003234491.1	petrobactin ABC transporter permease YclN	Machinery gene
BEST7003_RS02150 (BEST7003_0382)	yclO	433311..434258 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=65216 BEST7003_RS02120 WP_003246686.1 428827..429975(+) (rapC) [Bacillus subtilis BEST7003]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=65216 BEST7003_RS02120 WP_003246686.1 428827..429975(+) (rapC) [Bacillus subtilis BEST7003]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571