Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   OHT76_RS37655 Genome accession   NZ_CP108053
Coordinates   8304468..8304608 (-) Length   46 a.a.
NCBI ID   WP_328876774.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00287     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 8299468..8309608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT76_RS37630 (OHT76_37670) - 8300204..8301229 (+) 1026 WP_328875346.1 hypothetical protein -
  OHT76_RS37635 (OHT76_37675) - 8301409..8302182 (+) 774 WP_328875347.1 GNAT family N-acyltransferase -
  OHT76_RS37640 (OHT76_37680) - 8302272..8303147 (+) 876 WP_328876722.1 lysophospholipid acyltransferase family protein -
  OHT76_RS37645 (OHT76_37685) - 8303159..8303335 (-) 177 WP_328875348.1 hypothetical protein -
  OHT76_RS37650 (OHT76_37690) - 8303471..8304454 (+) 984 WP_328875349.1 BtrH N-terminal domain-containing protein -
  OHT76_RS37655 (OHT76_37695) uvrA 8304468..8304608 (-) 141 WP_328876774.1 hypothetical protein Machinery gene
  OHT76_RS37660 (OHT76_37700) - 8304649..8305920 (-) 1272 WP_328875350.1 DUF2716 domain-containing protein -
  OHT76_RS37665 (OHT76_37705) - 8305917..8306921 (-) 1005 WP_328875351.1 LLM class flavin-dependent oxidoreductase -
  OHT76_RS37670 (OHT76_37710) - 8306956..8308341 (-) 1386 WP_328875352.1 FAD-binding oxidoreductase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5063.74 Da        Isoelectric Point: 10.8285

>NTDB_id=652140 OHT76_RS37655 WP_328876774.1 8304468..8304608(-) (uvrA) [Streptomyces sp. NBC_00287]
MHDPYVRVRGAREHNLKGVDVDIPRDGLAVFTGVSGSGKSSLWRAR

Nucleotide


Download         Length: 141 bp        

>NTDB_id=652140 OHT76_RS37655 WP_328876774.1 8304468..8304608(-) (uvrA) [Streptomyces sp. NBC_00287]
ATGCACGACCCGTACGTTCGCGTCCGAGGCGCCCGCGAGCACAACCTCAAGGGCGTGGACGTCGACATCCCGCGGGACGG
GCTGGCCGTGTTCACCGGAGTCTCCGGCTCCGGGAAGTCCTCGCTCTGGCGCGCGCGTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

66.667

91.304

0.609
  uvrA Streptococcus pneumoniae D39

66.667

91.304

0.609
  uvrA Streptococcus pneumoniae TIGR4

66.667

91.304

0.609
  pilT Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

45.946

80.435

0.37