Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | L5471_RS13405 | Genome accession | NZ_CP091523 |
| Coordinates | 2727101..2727496 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain N12HSA28 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2722101..2732496
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L5471_RS13375 (L5471_13375) | - | 2723360..2723764 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| L5471_RS13380 (L5471_13380) | - | 2724102..2724194 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| L5471_RS13385 (L5471_13385) | - | 2724326..2724559 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| L5471_RS13390 (L5471_13390) | murA | 2724670..2725935 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| L5471_RS13395 (L5471_13395) | fabZ | 2725969..2726409 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| L5471_RS13400 (L5471_13400) | - | 2726467..2726907 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| L5471_RS13405 (L5471_13405) | ssb | 2727101..2727496 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| L5471_RS13410 (L5471_13410) | sceD | 2727885..2728580 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| L5471_RS13415 (L5471_13415) | tenA | 2729104..2729793 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| L5471_RS13420 (L5471_13420) | thiD | 2729786..2730616 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| L5471_RS13425 (L5471_13425) | thiM | 2730600..2731400 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| L5471_RS13430 (L5471_13430) | thiE | 2731393..2732034 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=652120 L5471_RS13405 WP_000932692.1 2727101..2727496(+) (ssb) [Staphylococcus aureus strain N12HSA28]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=652120 L5471_RS13405 WP_000932692.1 2727101..2727496(+) (ssb) [Staphylococcus aureus strain N12HSA28]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |