Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHT76_RS24450 Genome accession   NZ_CP108053
Coordinates   5365307..5366431 (-) Length   374 a.a.
NCBI ID   WP_328872999.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00287     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5360307..5371431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT76_RS24420 (OHT76_24440) cseB 5360651..5361355 (-) 705 WP_328872995.1 two-component system response regulator CseB -
  OHT76_RS24425 (OHT76_24445) - 5361439..5362050 (-) 612 WP_328872996.1 hypothetical protein -
  OHT76_RS24430 (OHT76_24450) - 5362101..5362640 (-) 540 WP_186283894.1 SigE family RNA polymerase sigma factor -
  OHT76_RS24435 (OHT76_24455) - 5362862..5363779 (-) 918 WP_328872997.1 A/G-specific adenine glycosylase -
  OHT76_RS24440 (OHT76_24460) - 5364004..5364090 (+) 87 Protein_4819 histidine kinase -
  OHT76_RS24445 (OHT76_24465) - 5364422..5365249 (+) 828 WP_328872998.1 hypothetical protein -
  OHT76_RS24450 (OHT76_24470) disA 5365307..5366431 (-) 1125 WP_328872999.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHT76_RS24455 (OHT76_24475) radA/sms 5366513..5367922 (-) 1410 WP_328873000.1 DNA repair protein RadA Machinery gene
  OHT76_RS24460 (OHT76_24480) - 5368140..5369885 (+) 1746 WP_328873001.1 hypothetical protein -
  OHT76_RS24465 (OHT76_24485) - 5369898..5370746 (-) 849 WP_328873002.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40056.80 Da        Isoelectric Point: 4.9235

>NTDB_id=652105 OHT76_RS24450 WP_328872999.1 5365307..5366431(-) (disA) [Streptomyces sp. NBC_00287]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALYELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=652105 OHT76_RS24450 WP_328872999.1 5365307..5366431(-) (disA) [Streptomyces sp. NBC_00287]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGCCTTGAGCGGATCCTCCGCGGCAACACCGGAGGGCTTATCGTGC
TGGGCTCCGACAAGACCGTCGAGGCCATGTGCACGGGTGGATTCGTGCTGGATGTCGAGTTCACGGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTCTCCTCCGACCTGTCGAAGATCCTTCGTGCCGGTGTGCAGCTGGTGCC
GGATCCGACGATCCCCACGGAAGAGACGGGCACACGGCACCGTACGGCGGACCGGGTCAGCAAGCAGGTCGGGTTCCCCG
TCGTCTCCGTCTCCCAGTCCATGCGGCTGATCGCCCTGTACGTCGACGGGCAGCGGCGGGTGCTGGAGGACTCCGCGGCG
ATTCTGTCCCGGGCGAATCAGGCGCTGGCGACCCTTGAGCGGTACAAGCTGCGCCTTGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTTGTGACGGTCCGGGATGTCTCGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CTACCGAAATCGCCGAGTATGTGGTGGAGCTGGGTACCGACGGGCGGCTTCTCGCGCTTCAGCTGGACGAGTTGATCGCG
GGTGTGGAGCCCGAGCGGGAGCTCGTGGTCCGGGACTATGTGCCCGAGCCGACGGCCAAGCGGTCCCGTACGGTCGAGGA
GGCGCTGTACGAGCTGGACGCGCTGAGCCATGCGGAGCTGTTGGAACTGCCCACGGTGGCTCGGGCGTTGGGGTACACAG
GGTCGCCCGAAGCGCTGGACTCCGCGGTGTCGCCGCGTGGGTTCCGGCTGCTGGCGAAGGTGCCTCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGATCTGCAGACCGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGGTTGGCGGAGTCTTCGATTCTCGAGAGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441