Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   SPYJRS4_RS08925 Genome accession   NZ_AP012335
Coordinates   1810347..1811123 (+) Length   258 a.a.
NCBI ID   WP_002981939.1    Uniprot ID   -
Organism   Streptococcus pyogenes JRS4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1805347..1816123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYJRS4_RS08900 (SPYJRS4_1885) - 1805871..1806974 (-) 1104 WP_011185110.1 IS30 family transposase -
  SPYJRS4_RS08905 (SPYJRS4_1886) - 1807174..1807948 (-) 775 Protein_1723 IS30 family transposase -
  SPYJRS4_RS08915 (SPYJRS4_1888) rlmH 1808343..1808822 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SPYJRS4_RS08920 (SPYJRS4_1889) htrA 1809035..1810258 (+) 1224 WP_002991468.1 trypsin-like peptidase domain-containing protein Regulator
  SPYJRS4_RS08925 (SPYJRS4_1890) spo0J 1810347..1811123 (+) 777 WP_002981939.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29056.87 Da        Isoelectric Point: 10.3100

>NTDB_id=65207 SPYJRS4_RS08925 WP_002981939.1 1810347..1811123(+) (spo0J) [Streptococcus pyogenes JRS4]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKIPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=65207 SPYJRS4_RS08925 WP_002981939.1 1810347..1811123(+) (spo0J) [Streptococcus pyogenes JRS4]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAATTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACCCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.144

99.612

0.589


Multiple sequence alignment