Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHT51_RS18910 Genome accession   NZ_CP108039
Coordinates   4332105..4333229 (+) Length   374 a.a.
NCBI ID   WP_328425026.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00299     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4327105..4338229
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT51_RS18895 (OHT51_18940) - 4327730..4328596 (+) 867 WP_328880113.1 hypothetical protein -
  OHT51_RS18900 (OHT51_18945) - 4328619..4330403 (-) 1785 WP_328880114.1 hypothetical protein -
  OHT51_RS18905 (OHT51_18950) radA 4330614..4332023 (+) 1410 WP_328880115.1 DNA repair protein RadA Machinery gene
  OHT51_RS18910 (OHT51_18955) disA 4332105..4333229 (+) 1125 WP_328425026.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHT51_RS18915 (OHT51_18960) - 4333294..4334109 (-) 816 WP_328880116.1 hypothetical protein -
  OHT51_RS18920 (OHT51_18965) - 4334295..4334927 (+) 633 WP_328880117.1 phosphatase PAP2 family protein -
  OHT51_RS18925 (OHT51_18970) - 4334931..4335590 (-) 660 WP_328880118.1 response regulator transcription factor -
  OHT51_RS18930 (OHT51_18975) - 4335587..4337209 (-) 1623 WP_328880119.1 histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40083.83 Da        Isoelectric Point: 5.0029

>NTDB_id=651916 OHT51_RS18910 WP_328425026.1 4332105..4333229(+) (disA) [Streptomyces sp. NBC_00299]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEVMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGHRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=651916 OHT51_RS18910 WP_328425026.1 4332105..4333229(+) (disA) [Streptomyces sp. NBC_00299]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTTGAGCGGATCCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAGGTGATGTGCACGGGCGGATTCGTCCTGGATGTCGAGTTCACGGCGACGCGACTGCGT
GAGCTGTGCAAGCTCGACGGCGGGATCGTGCTGTCGTCGGATCTGTCGAAGATCCTGCGCGCGGGCGTCCAGCTGGTCCC
GGACCCGACGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCCATGCGGCTGATCGCGCTCTACGTCGACGGCCACCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTGACGGTCCGCGACGTCTCCGCGGTCGCCCAGCGCCTGGAGATGGTCCGGCGCATCG
CGACCGAGATCGCCGAATACGTGGTGGAGCTCGGCACCGACGGACGTCTCCTGGCCCTTCAGCTGGACGAATTGATCGCG
GGCGTGGAGCCCGAGCGCGAGCTCGTGGTGCGCGACTACGTCCCCGAGCCGACGGCGAAGCGCTCCCGCACGGTCGACGA
GGCGCTGTACGAGCTGGACGCGCTCACCCACGCCGAGCTTCTCGAACTTTCCACGGTGGCAAGAGCGTTGGGCTACACCG
GCTCCCCGGAGGCGCTGGACTCCGCGGTCTCCCCGCGCGGCTTCCGCCTCCTGGCCAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGACCGCCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGCGTCCGTGAGGGCCTGTCGCGGTTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441