Detailed information NTG0651609

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG878_RS26225
• Genome accession: NZ_CP108023
• Coordinates: 5903323..5904621 (+)
• Length: 432 a.a.
• NCBI ID: WP_277326182.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00316
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5898323..5909621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG878_RS26195 (OG878_26240)	-	5899414..5899608 (+)	195	WP_328889045.1	hypothetical protein	-
OG878_RS26210 (OG878_26255)	tig	5900177..5901565 (+)	1389	WP_328889046.1	trigger factor	-
OG878_RS26215 (OG878_26260)	-	5901829..5902434 (+)	606	WP_018551584.1	ATP-dependent Clp protease proteolytic subunit	-
OG878_RS26220 (OG878_26265)	clpP	5902482..5903165 (+)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG878_RS26225 (OG878_26270)	clpX	5903323..5904621 (+)	1299	WP_277326182.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG878_RS26230 (OG878_26275)	-	5904698..5905720 (-)	1023	WP_328889047.1	hypothetical protein	-
OG878_RS26235 (OG878_26280)	-	5905859..5908480 (+)	2622	WP_328889048.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47284.11 Da
• Isoelectric Point: 4.8824

>NTDB_id=651609 OG878_RS26225 WP_277326182.1 5903323..5904621(+) (clpX) [Streptomyces sp. NBC_00316]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=651609 OG878_RS26225 WP_277326182.1 5903323..5904621(+) (clpX) [Streptomyces sp. NBC_00316]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGACTGGAGAGGATCATCGAGTCGCGGGCGGGAGC
CAAAGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAATTCATCGGCCGCCTCCCCGTGCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTGCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGTGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509