Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG878_RS22515 Genome accession   NZ_CP108023
Coordinates   5055247..5056371 (-) Length   374 a.a.
NCBI ID   WP_277326809.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00316     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5050247..5061371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG878_RS22490 (OG878_22535) cseB 5050801..5051505 (-) 705 WP_328888445.1 two-component system response regulator CseB -
  OG878_RS22495 (OG878_22540) - 5051560..5052171 (-) 612 WP_328891333.1 hypothetical protein -
  OG878_RS22500 (OG878_22545) - 5052240..5052890 (-) 651 WP_328888446.1 SigE family RNA polymerase sigma factor -
  OG878_RS22505 (OG878_22550) - 5053079..5053981 (-) 903 WP_328888447.1 A/G-specific adenine glycosylase -
  OG878_RS22510 (OG878_22555) - 5054329..5055129 (+) 801 WP_328888448.1 hypothetical protein -
  OG878_RS22515 (OG878_22560) disA 5055247..5056371 (-) 1125 WP_277326809.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG878_RS22520 (OG878_22565) radA/sms 5056451..5057863 (-) 1413 WP_277326808.1 DNA repair protein RadA Machinery gene
  OG878_RS22525 (OG878_22570) - 5058032..5059855 (+) 1824 WP_328888449.1 hypothetical protein -
  OG878_RS22530 (OG878_22575) - 5059899..5060747 (-) 849 WP_328888450.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40408.30 Da        Isoelectric Point: 4.9372

>NTDB_id=651600 OG878_RS22515 WP_277326809.1 5055247..5056371(-) (disA) [Streptomyces sp. NBC_00316]
MAANDRASSPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVTEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=651600 OG878_RS22515 WP_277326809.1 5055247..5056371(-) (disA) [Streptomyces sp. NBC_00316]
GTGGCAGCCAACGACCGGGCATCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGGATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTCGCCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACGAAGATCCTCCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACAGGTACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGCGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCGCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTCGTGACGGTGCGGGACGTGACGGCGGTCGCACAGCGCCTGGAAATGGTCCGGCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGTCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAGCCGGAGCGCGAGCTCGTCGTGCGCGATTACGTGCCGGAGCCGACCGCCAAGCGGTCCCGCACGGTCACGGA
GGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCACGGGCCCTGGGGTACAGCG
GCTCGCCCGAGACCCTCGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATCCTTGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436