Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   L2I54_RS21175 Genome accession   NZ_CP091476
Coordinates   4151255..4152049 (-) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus cereus strain GSICC 30237     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4146255..4157049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2I54_RS21150 (L2I54_21095) - 4146778..4148850 (-) 2073 WP_061457711.1 sigma-54-dependent Fis family transcriptional regulator -
  L2I54_RS21155 (L2I54_21100) - 4148988..4149221 (+) 234 WP_001190211.1 DUF2627 domain-containing protein -
  L2I54_RS21160 (L2I54_21105) - 4149271..4149999 (-) 729 WP_061457699.1 glycerophosphodiester phosphodiesterase -
  L2I54_RS21165 (L2I54_21110) - 4150050..4150196 (+) 147 WP_001247671.1 YycC family protein -
  L2I54_RS21170 (L2I54_21115) - 4150438..4151001 (-) 564 WP_061457700.1 PRK06770 family protein -
  L2I54_RS21175 (L2I54_21120) spo0A 4151255..4152049 (-) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  L2I54_RS21180 (L2I54_21125) spoIVB 4152340..4153638 (-) 1299 WP_002000940.1 SpoIVB peptidase -
  L2I54_RS21185 (L2I54_21130) recN 4153757..4155496 (-) 1740 WP_256627359.1 DNA repair protein RecN Machinery gene
  L2I54_RS21190 (L2I54_21135) argR 4155761..4156210 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=651598 L2I54_RS21175 WP_011110369.1 4151255..4152049(-) (spo0A) [Bacillus cereus strain GSICC 30237]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=651598 L2I54_RS21175 WP_011110369.1 4151255..4152049(-) (spo0A) [Bacillus cereus strain GSICC 30237]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCCGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAGAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTTGGCCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAATGCTATGATTAAGCGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAATGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAAGCTAGTTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818