Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG905_RS18115 Genome accession   NZ_CP108019
Coordinates   4017175..4018299 (+) Length   374 a.a.
NCBI ID   WP_266479620.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00322     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4012175..4023299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG905_RS18100 (OG905_18105) - 4012738..4013589 (+) 852 WP_328672905.1 hypothetical protein -
  OG905_RS18105 (OG905_18110) - 4013739..4015457 (-) 1719 WP_328672908.1 hypothetical protein -
  OG905_RS18110 (OG905_18115) radA/sms 4015640..4017073 (+) 1434 WP_328672910.1 DNA repair protein RadA Machinery gene
  OG905_RS18115 (OG905_18120) disA 4017175..4018299 (+) 1125 WP_266479620.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG905_RS18120 (OG905_18125) - 4018393..4019202 (-) 810 WP_328672914.1 hypothetical protein -
  OG905_RS18125 (OG905_18130) - 4019384..4020292 (+) 909 WP_328672917.1 A/G-specific adenine glycosylase -
  OG905_RS18130 (OG905_18135) - 4020557..4021129 (+) 573 WP_328672918.1 SigE family RNA polymerase sigma factor -
  OG905_RS18135 (OG905_18140) - 4021117..4021788 (+) 672 WP_328672921.1 hypothetical protein -
  OG905_RS18140 (OG905_18145) cseB 4021801..4022508 (+) 708 WP_328672923.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40249.04 Da        Isoelectric Point: 4.9451

>NTDB_id=651511 OG905_RS18115 WP_266479620.1 4017175..4018299(+) (disA) [Streptomyces sp. NBC_00322]
MAAKDGAGAPGKSGGGSGNEALIRAALSAVAPGQALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDISKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELNDLTHTELLELPIVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=651511 OG905_RS18115 WP_266479620.1 4017175..4018299(+) (disA) [Streptomyces sp. NBC_00322]
GTGGCAGCCAAGGACGGGGCAGGTGCACCCGGAAAGTCCGGCGGAGGCTCCGGCAACGAAGCACTGATCCGCGCCGCACT
GAGCGCGGTCGCGCCCGGGCAGGCCCTCCGCGACGGCCTCGAGCGGATCCTCCGCGGCAACACCGGAGGCCTGATCGTCC
TCGGCATGGACAAAACGGTCGAATCCATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCAGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGCGCTCATCCTCGACAAGGACATCAGCAAGATCCACCGGGCCGGTGTGCAACTGGTCCC
GGACGCGTCCATCCCCACCGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGGGTCTCGCGCCAGTGCGGCTTCCCCG
TCGTATCCGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTTGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCGAACCAGGCGCTCGCGACCCTTGAGCGCTACAAACTCCGCCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTGACGGCGGTGGCTCAGCGCCTGGAGATGGTGCGCCGGATCG
CGACCGAGATCGCCGAGTACGTGGTGGAGTTGGGCACCGACGGCCGCCTTCTCTCGCTGCAGCTGGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGGGAGCTGGTCGTACGCGACTACGTGCCGGAGCCGACGGCGAAGCGGTCGCGCACGGTGGACGA
GGCGCTTGCCGAGCTGAACGACCTCACCCACACCGAACTGCTCGAACTGCCCATAGTGGCAAGGGCGTTGGGCTACAGCG
GCTCACCCGAGACGCTCGACTCCGCGGTCTCGCCGCGCGGTTACCGTCTGCTGGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTCGAGCACTTCGGCGGTCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGATCTGCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCACGGAGCGTGCGCGAGGGCCTGTCGCGGCTGGCGGAGTCCTCGATCCTCGAGCGGTACG
TGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438