Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHB16_RS20105 Genome accession   NZ_CP108008
Coordinates   4328781..4329905 (-) Length   374 a.a.
NCBI ID   WP_271319621.1    Uniprot ID   A0ABV9WWH1
Organism   Streptomyces sp. NBC_00334     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4323781..4334905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHB16_RS20085 (OHB16_20100) - 4324630..4326246 (+) 1617 WP_328658717.1 histidine kinase -
  OHB16_RS20090 (OHB16_20105) - 4326243..4326914 (+) 672 WP_271319618.1 response regulator transcription factor -
  OHB16_RS20095 (OHB16_20110) - 4327014..4327676 (-) 663 WP_271319619.1 phosphatase PAP2 family protein -
  OHB16_RS20100 (OHB16_20115) - 4327851..4328705 (+) 855 WP_271319620.1 hypothetical protein -
  OHB16_RS20105 (OHB16_20120) disA 4328781..4329905 (-) 1125 WP_271319621.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHB16_RS20110 (OHB16_20125) radA/sms 4329987..4331396 (-) 1410 WP_271319622.1 DNA repair protein RadA Machinery gene
  OHB16_RS20115 (OHB16_20130) - 4331608..4333364 (+) 1757 Protein_3956 hypothetical protein -
  OHB16_RS20120 (OHB16_20135) - 4333395..4334207 (-) 813 WP_271319623.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40061.80 Da        Isoelectric Point: 5.0058

>NTDB_id=651356 OHB16_RS20105 WP_271319621.1 4328781..4329905(-) (disA) [Streptomyces sp. NBC_00334]
MAANDRAAAPGKSGGSAGADGLMRASLSAVAPGTSLRDGLERVLRGNTGGLMVLGSDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLLPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDKLSHAELLELSTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=651356 OHB16_RS20105 WP_271319621.1 4328781..4329905(-) (disA) [Streptomyces sp. NBC_00334]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGTGCCGGTGCCGATGGCCTGATGCGCGCCTCGCT
CAGCGCCGTGGCGCCCGGGACGTCCCTGCGGGACGGCCTGGAGCGGGTCCTGCGCGGCAACACCGGCGGTCTGATGGTGC
TGGGCTCCGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTGCGGGCGGGGGTGCAGCTCCTGCC
GGATCCGACGATCCCCACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGCGTCAGCAAGCAGGTCGGCTTCCCCG
TCGTCTCCGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCCAGCGGCGCGTGCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCCAACCAGGCACTGGCGACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCCGGCACCCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCTCGGCGGTCGCGCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAACTGGGGACGGACGGACGGCTGCTGGCCCTGCAGTTGGACGAGCTGATCGCC
GGTGTGGAGCCCGAGCGCGAGCTGGTCGTGCGGGACTACGTGCCCGAGCCGACAGCGAAGCGGTCCCGTACGGTCGACGA
GGCGCTGGCCGAGCTGGACAAGCTCAGCCACGCCGAGCTGCTGGAACTGTCGACGGTGGCCCGGGCCCTGGGCTACACCG
GGTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGGTTCCGGCTGCTGGCGAAGGTGCCCCGGCTGCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGTGTGGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGCGCAGCGTGCGGGAGGGGCTGTCGCGGCTGGCCGAGTCGTCGATCCTGGAGCGCTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444