Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA37_RS16400 Genome accession   NZ_CP108006
Coordinates   3676519..3677643 (+) Length   374 a.a.
NCBI ID   WP_266905879.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00335     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3671519..3682643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA37_RS16385 (OHA37_16380) - 3671985..3672821 (+) 837 WP_266905873.1 hypothetical protein -
  OHA37_RS16390 (OHA37_16385) - 3672831..3674657 (-) 1827 WP_266905875.1 hypothetical protein -
  OHA37_RS16395 (OHA37_16390) radA/sms 3674854..3676269 (+) 1416 WP_266905877.1 DNA repair protein RadA Machinery gene
  OHA37_RS16400 (OHA37_16395) disA 3676519..3677643 (+) 1125 WP_266905879.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA37_RS16405 (OHA37_16400) - 3677776..3678606 (-) 831 WP_266905881.1 hypothetical protein -
  OHA37_RS16410 (OHA37_16405) - 3678775..3679383 (+) 609 WP_266905883.1 phosphatase PAP2 family protein -
  OHA37_RS16415 (OHA37_16410) - 3679458..3680387 (+) 930 WP_266905885.1 A/G-specific adenine glycosylase -
  OHA37_RS16420 (OHA37_16415) - 3680567..3681127 (+) 561 WP_053678383.1 SigE family RNA polymerase sigma factor -
  OHA37_RS16425 (OHA37_16420) - 3681166..3681822 (+) 657 WP_266905890.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40360.34 Da        Isoelectric Point: 5.1189

>NTDB_id=651248 OHA37_RS16400 WP_266905879.1 3676519..3677643(+) (disA) [Streptomyces sp. NBC_00335]
MAAKDGAAASGKSGASSKQDAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=651248 OHA37_RS16400 WP_266905879.1 3676519..3677643(+) (disA) [Streptomyces sp. NBC_00335]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGAAAGTCGGGCGCGAGCTCCAAGCAGGACGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGTGACGGGCTCGAACGGATCGTTCGCGGCAACACCGGAGGGCTCATCGTCC
TCGGCATGGACAAGTCCGTCGAGGCCATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACATCACCAAGATCCTGCGCGCGGGCGTCCAGCTGGTGCC
CGACGCGTCGATCCACACGGAAGAGACGGGCACCCGGCACCGGACCGCGGACCGGGTCTCGAAGCAGTGCGGATTCCCGG
TGGTGTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGCGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTCGCCGGAACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGATGTCACGGCGGTGGCGCAGCGGCTGGAAATGGTGCGGCGCATCG
CGACGGAGATCGCGGAGTACGTGGTGGAGCTCGGCACGGACGGCCGGCTGCTCTCGCTCCAGCTCGACGAGCTGACGGTA
GGGATCGAGCAGGAGCGGGAGCTCGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
GGCACTGCCGGCGCTGGACGCGCTCACGCATCCGGAGCTGCTGGAGCTGGCGATCGTGGCGAAGGCCCTCGGGTACACGG
GCTCGCCGGAGACCCTGGACTCGGCGGTGTCGCCCCGCGGGTACCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGCGCC
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCCGCCTCGGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCGCGTGCGCGCAGCGTGCGCGAGGGGCTGTCGCGGCTGGCGGAGTCCTCCATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.26

96.524

0.447