Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   LZS83_RS20620 Genome accession   NZ_CP091444
Coordinates   4042036..4042830 (-) Length   264 a.a.
NCBI ID   WP_033686380.1    Uniprot ID   A0A4Y6EYG5
Organism   Bacillus cereus strain MO2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4037036..4047830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZS83_RS20595 - 4037461..4039533 (-) 2073 WP_242252177.1 sigma-54-dependent Fis family transcriptional regulator -
  LZS83_RS20600 - 4039670..4039903 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  LZS83_RS20605 - 4039953..4040681 (-) 729 WP_063223009.1 glycerophosphodiester phosphodiesterase -
  LZS83_RS20610 - 4040732..4040878 (+) 147 WP_309259310.1 YycC family protein -
  LZS83_RS20615 - 4041118..4041680 (-) 563 Protein_4008 PRK06770 family protein -
  LZS83_RS20620 spo0A 4042036..4042830 (-) 795 WP_033686380.1 sporulation transcription factor Spo0A Regulator
  LZS83_RS20625 spoIVB 4043118..4044416 (-) 1299 WP_063223004.1 SpoIVB peptidase -
  LZS83_RS20630 recN 4044535..4046274 (-) 1740 WP_242252181.1 DNA repair protein RecN Machinery gene
  LZS83_RS20635 argR 4046542..4046991 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4718

>NTDB_id=651206 LZS83_RS20620 WP_033686380.1 4042036..4042830(-) (spo0A) [Bacillus cereus strain MO2]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=651206 LZS83_RS20620 WP_033686380.1 4042036..4042830(-) (spo0A) [Bacillus cereus strain MO2]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGTTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATAGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TTTTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATCGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGATTTAGGTGCTTCCTATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTAAGCGGTAAGGCAAACGCTACTATTAAACGTCCAC
TTCCATCTTTCCGTTCAGCAACGACAATAGATGGAAAGCCGAAAAACTTAGATGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATATATGTACTTAAGGGAAGCAATCTCTATGGTGTATAACGATATAGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAAAAATATAATACAACAGCAAGCCGTGTCGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6EYG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818