Detailed information NTG0651111

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA41_RS25775
• Genome accession: NZ_CP107999
• Coordinates: 5788801..5790099 (+)
• Length: 432 a.a.
• NCBI ID: WP_327336834.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00342
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5783801..5795099

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA41_RS25745 (OHA41_25755)	-	5784831..5785025 (+)	195	WP_145763503.1	hypothetical protein	-
OHA41_RS25760 (OHA41_25770)	tig	5785617..5787014 (+)	1398	WP_327336835.1	trigger factor	-
OHA41_RS25765 (OHA41_25775)	-	5787279..5787884 (+)	606	WP_164494417.1	ATP-dependent Clp protease proteolytic subunit	-
OHA41_RS25770 (OHA41_25780)	clpP	5787960..5788643 (+)	684	WP_024492986.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA41_RS25775 (OHA41_25785)	clpX	5788801..5790099 (+)	1299	WP_327336834.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA41_RS25780 (OHA41_25790)	-	5790175..5791173 (-)	999	WP_328696906.1	hypothetical protein	-
OHA41_RS25785 (OHA41_25795)	-	5791324..5793945 (+)	2622	WP_328696907.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47362.18 Da
• Isoelectric Point: 4.7809

>NTDB_id=651111 OHA41_RS25775 WP_327336834.1 5788801..5790099(+) (clpX) [Streptomyces sp. NBC_00342]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=651111 OHA41_RS25775 WP_327336834.1 5788801..5790099(+) (clpX) [Streptomyces sp. NBC_00342]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCC
GCGAAGAAGGCTCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGGGGCGAGCCG
TGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTTGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCGGACCAGGCGATCCTGCGCCAGACCGGCGCCCGAGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCTGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGGAAGAACGACGACGGCAG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.268	93.287	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509