Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   L3V45_RS14905 Genome accession   NZ_CP091421
Coordinates   3021409..3023709 (-) Length   766 a.a.
NCBI ID   WP_236837055.1    Uniprot ID   -
Organism   Bacillus sp. R45     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3016409..3028709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L3V45_RS14865 (L3V45_14865) - 3016869..3017300 (+) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -
  L3V45_RS14870 (L3V45_14870) - 3017300..3017641 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  L3V45_RS14875 (L3V45_14875) - 3017634..3019115 (+) 1482 WP_003152061.1 Na+/H+ antiporter subunit D -
  L3V45_RS14880 (L3V45_14880) - 3019121..3019597 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  L3V45_RS14885 (L3V45_14885) - 3019597..3019881 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  L3V45_RS14890 (L3V45_14890) mnhG 3019865..3020239 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  L3V45_RS14895 (L3V45_14895) - 3020279..3020662 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  L3V45_RS14900 (L3V45_14900) comA 3020684..3021328 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  L3V45_RS14905 (L3V45_14905) comP 3021409..3023709 (-) 2301 WP_236837055.1 histidine kinase Regulator
  L3V45_RS14910 (L3V45_14910) comX 3023723..3023896 (-) 174 WP_012118314.1 competence pheromone ComX -
  L3V45_RS14915 (L3V45_14915) - 3023865..3024725 (-) 861 WP_159073777.1 polyprenyl synthetase family protein -
  L3V45_RS14920 (L3V45_14920) degQ 3024933..3025073 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  L3V45_RS14925 (L3V45_14925) - 3025539..3025880 (+) 342 WP_014305721.1 hypothetical protein -
  L3V45_RS14930 (L3V45_14930) - 3025887..3027107 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  L3V45_RS14935 (L3V45_14935) - 3027237..3028703 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88293.57 Da        Isoelectric Point: 7.2027

>NTDB_id=650962 L3V45_RS14905 WP_236837055.1 3021409..3023709(-) (comP) [Bacillus sp. R45]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITIGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMISKVCVLEVEGDLNIRCFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGSKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=650962 L3V45_RS14905 WP_236837055.1 3021409..3023709(-) (comP) [Bacillus sp. R45]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTGATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTGTTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATAAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTTAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACAGGTATAGCATAT
GTGAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTTTATTTTTCATTACCATAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCATTAAAACAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGATTAGTAAAGTATGTGTTTTAGAAGTAGAAGGAGACTTAAATATAAGGTGTTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAAATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCAGTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACCTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCACCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATCAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.397

100

0.564