Detailed information NTG0650941

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHS16_RS20915
• Genome accession: NZ_CP107996
• Coordinates: 4641502..4642794 (+)
• Length: 430 a.a.
• NCBI ID: WP_328538749.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00344
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4636502..4647794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHS16_RS20885 (OHS16_20885)	-	4637481..4637675 (+)	195	WP_328538745.1	hypothetical protein	-
OHS16_RS20900 (OHS16_20900)	tig	4638339..4639727 (+)	1389	WP_328538746.1	trigger factor	-
OHS16_RS20905 (OHS16_20905)	clpP	4639994..4640611 (+)	618	WP_328538747.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS16_RS20910 (OHS16_20910)	clpP	4640662..4641345 (+)	684	WP_328538748.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS16_RS20915 (OHS16_20915)	clpX	4641502..4642794 (+)	1293	WP_328538749.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHS16_RS20920 (OHS16_20920)	-	4642875..4643885 (-)	1011	WP_328538750.1	hypothetical protein	-
OHS16_RS20925 (OHS16_20925)	-	4644022..4646646 (+)	2625	WP_328538751.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47115.87 Da
• Isoelectric Point: 4.7809

>NTDB_id=650941 OHS16_RS20915 WP_328538749.1 4641502..4642794(+) (clpX) [Streptomyces sp. NBC_00344]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=650941 OHS16_RS20915 WP_328538749.1 4641502..4642794(+) (clpX) [Streptomyces sp. NBC_00344]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGACCTCTGCAACGAGATCATTGAGGAGGAACTCGCAGAGACCT
CCGAAGTGCGGTGGGAGGAATTGCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAAGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGTGCGAACCG
CGAGGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCGGGCAAGACGCTGCTGGCGCAGA
CGCTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCCACGGCGCTGACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCGGGCGAGGGCGTACAGCAGGCCC
TCCTCAAGATTCTGGAAGGCACCACCGCGTCGGTGCCGCCGCAGGGCGGCCGTAAGCATCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGTGGCGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCGCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTTCCCGTACTGACCTCGGTGCACAACCTGGACCGC
GAAGCCCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCACTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGTCCCTCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGGGGCACCGGGGCGCGAGGTCTGC
GCGCCATCATGGAAGAGGTGCTGCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACC
GCGGACGTGGTCCGCGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGCATCGTCGGCAACGACGGGCGGCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.488	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509