Detailed information NTG0650867

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA88_RS30035
• Genome accession: NZ_CP107985
• Coordinates: 6668289..6669587 (+)
• Length: 432 a.a.
• NCBI ID: WP_030970081.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00353
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6663289..6674587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA88_RS30005 (OHA88_30060)	-	6664411..6664605 (+)	195	WP_136325240.1	hypothetical protein	-
OHA88_RS30020 (OHA88_30075)	tig	6665142..6666530 (+)	1389	WP_328627813.1	trigger factor	-
OHA88_RS30025 (OHA88_30080)	-	6666795..6667400 (+)	606	WP_267008104.1	ATP-dependent Clp protease proteolytic subunit	-
OHA88_RS30030 (OHA88_30085)	clpP	6667448..6668131 (+)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA88_RS30035 (OHA88_30090)	clpX	6668289..6669587 (+)	1299	WP_030970081.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA88_RS30040 (OHA88_30095)	-	6669664..6670647 (-)	984	WP_328627814.1	hypothetical protein	-
OHA88_RS30045 (OHA88_30100)	-	6670786..6673407 (+)	2622	WP_328627815.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47284.11 Da
• Isoelectric Point: 4.8824

>NTDB_id=650867 OHA88_RS30035 WP_030970081.1 6668289..6669587(+) (clpX) [Streptomyces sp. NBC_00353]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENAGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=650867 OHA88_RS30035 WP_030970081.1 6668289..6669587(+) (clpX) [Streptomyces sp. NBC_00353]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGCCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCATCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCACTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTTC
GGGCCATCATGGAGGAAGTTCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509