Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA88_RS26295 Genome accession   NZ_CP107985
Coordinates   5801409..5802533 (-) Length   374 a.a.
NCBI ID   WP_030972387.1    Uniprot ID   A0ABV2U8C8
Organism   Streptomyces sp. NBC_00353     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5796409..5807533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA88_RS26270 (OHA88_26310) - 5797184..5797795 (-) 612 WP_328627299.1 hypothetical protein -
  OHA88_RS26275 (OHA88_26315) - 5797864..5798514 (-) 651 WP_267004532.1 SigE family RNA polymerase sigma factor -
  OHA88_RS26280 (OHA88_26320) - 5798690..5799592 (-) 903 WP_328627300.1 A/G-specific adenine glycosylase -
  OHA88_RS26285 (OHA88_26325) - 5799718..5800224 (-) 507 WP_328629797.1 phosphatase PAP2 family protein -
  OHA88_RS26290 (OHA88_26330) - 5800445..5801254 (+) 810 WP_328627301.1 hypothetical protein -
  OHA88_RS26295 (OHA88_26335) disA 5801409..5802533 (-) 1125 WP_030972387.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA88_RS26300 (OHA88_26340) radA/sms 5802614..5804026 (-) 1413 WP_267004537.1 DNA repair protein RadA Machinery gene
  OHA88_RS26305 (OHA88_26345) - 5804266..5806050 (+) 1785 WP_328627302.1 hypothetical protein -
  OHA88_RS26310 (OHA88_26350) - 5806082..5806951 (-) 870 WP_267004539.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40389.30 Da        Isoelectric Point: 4.8644

>NTDB_id=650858 OHA88_RS26295 WP_030972387.1 5801409..5802533(-) (disA) [Streptomyces sp. NBC_00353]
MAASDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDGLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEYFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650858 OHA88_RS26295 WP_030972387.1 5801409..5802533(-) (disA) [Streptomyces sp. NBC_00353]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCATT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGCGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACGCGGCTGCGC
GAGCTGGCCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGAACCCGCCACCGCACGGCGGACCGGGTCTCCAGGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGTCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGTGCCAACCAGGCCCTCGCCACCCTGGAGCGATACAAGCTCCGCCTCGATGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGACGGCTGTCGCACAACGTCTGGAGATGGTCCGCCGGATCG
CGACCGAAATCGCCGAATATGTGGTGGAACTGGGCACCGACGGCCGGCTTCTCTCCCTCCAGCTCGACGAGTTGATCGCG
GGAGTCGAGCCGGAGCGAGAGCTGGTCGTGCGTGACTACGTGCCGGAGCCGACCGCCAAGCGGTCGCGTACGGTCGCGGA
GGCGCTGACCGAGCTGGACGGGCTCTCCCACACCGAGTTGCTCGAACTCCCGGTGGTGGCACGGGCCCTGGGGTACAGCG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCGCCCCGCGGTTTCCGGTTGCTGGCGAAGGTGCCGCGGCTCCCCGGGGCG
ATCATCGACCGGCTGGTGGAGTACTTCGGCGGACTGCAGAAGCTGCTCGCGGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGAGTCGGCGAGGCGCGGGCGCGGAGCGTGCGCGAGGGGCTGTCGCGACTGGCCGAGTCGTCGATTCTTGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433