Detailed information NTG0650607

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT01_RS26165
• Genome accession: NZ_CP107976
• Coordinates: 6144719..6146005 (+)
• Length: 428 a.a.
• NCBI ID: WP_328555559.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00358
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6139719..6151005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT01_RS26135 (OHT01_26100)	-	6140184..6140378 (+)	195	WP_328555556.1	hypothetical protein	-
OHT01_RS26150 (OHT01_26115)	tig	6141316..6142695 (+)	1380	WP_328555557.1	trigger factor	-
OHT01_RS26155 (OHT01_26120)	clpP	6143156..6143761 (+)	606	WP_328558268.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT01_RS26160 (OHT01_26125)	clpP	6143878..6144558 (+)	681	WP_328555558.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT01_RS26165 (OHT01_26130)	clpX	6144719..6146005 (+)	1287	WP_328555559.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT01_RS26170 (OHT01_26135)	-	6146092..6147057 (-)	966	WP_328555560.1	hypothetical protein	-
OHT01_RS26175 (OHT01_26140)	-	6147194..6149845 (+)	2652	WP_328555561.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46925.80 Da
• Isoelectric Point: 4.8809

>NTDB_id=650607 OHT01_RS26165 WP_328555559.1 6144719..6146005(+) (clpX) [Streptomyces sp. NBC_00358]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELESKDQFAAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLRNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=650607 OHT01_RS26165 WP_328555559.1 6144719..6146005(+) (clpX) [Streptomyces sp. NBC_00358]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGGCAGGAGTCG
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACAGCACGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGCGAGGGTGTGCAGCAGGCGC
TCCTGAAGATCCTCGAGGGCACGACGGCCTCGGTGCCGCCCCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGGAGTCCAAGGACCAGTTCGCGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGTGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACC
GCCGACGTGGTCCTGCGCAACGTCAACCCGACCCTGATCCCGCGCGACGCCCGGGGCCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.035	94.159	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519