Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHT01_RS18200 Genome accession   NZ_CP107976
Coordinates   4325351..4326475 (+) Length   374 a.a.
NCBI ID   WP_261704645.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00358     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4320351..4331475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHT01_RS18185 (OHT01_18170) - 4320682..4321521 (+) 840 WP_328554192.1 hypothetical protein -
  OHT01_RS18190 (OHT01_18175) - 4321665..4323461 (-) 1797 WP_328554193.1 hypothetical protein -
  OHT01_RS18195 (OHT01_18180) radA 4323873..4325282 (+) 1410 WP_328554194.1 DNA repair protein RadA Machinery gene
  OHT01_RS18200 (OHT01_18185) disA 4325351..4326475 (+) 1125 WP_261704645.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHT01_RS18205 (OHT01_18190) - 4326650..4327489 (-) 840 WP_328554195.1 hypothetical protein -
  OHT01_RS18210 (OHT01_18195) - 4327681..4328598 (+) 918 WP_328554196.1 A/G-specific adenine glycosylase -
  OHT01_RS18215 (OHT01_18200) - 4328851..4329390 (+) 540 WP_328554197.1 SigE family RNA polymerase sigma factor -
  OHT01_RS18220 (OHT01_18205) - 4329378..4330028 (+) 651 WP_328554198.1 hypothetical protein -
  OHT01_RS18225 (OHT01_18210) cseB 4330048..4330755 (+) 708 WP_328554199.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40025.79 Da        Isoelectric Point: 4.9234

>NTDB_id=650586 OHT01_RS18200 WP_261704645.1 4325351..4326475(+) (disA) [Streptomyces sp. NBC_00358]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALSELDALAHAELLELSTVAKALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650586 OHT01_RS18200 WP_261704645.1 4325351..4326475(+) (disA) [Streptomyces sp. NBC_00358]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
GAGCGCCGTGGCACCCGGCACGGCGCTGCGCGACGGGCTTGAACGGATCCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGTACGGGCGGGTTCGTCCTGGATGTGGAGTTCACCGCGACCCGTCTGCGT
GAACTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAGATCCTCCGGGCGGGCGTGCAACTGGTGCC
CGACCCGACCATCCCGACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTCTCGGTCTCCCAGTCGATGCGTCTGATCGCGCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCGCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCTCCGCGGTCGCGCAGCGTCTGGAGATGGTGCGCCGCATCG
CCACCGAGATCGCCGAGTACGTCGTCGAACTGGGCACGGACGGACGCCTGCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGATCGCGAACTGGTCGTCCGGGACTACGTGCCCGAGCCGACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCGCTCGCCCACGCCGAGTTGCTCGAACTCTCCACGGTGGCAAAGGCGTTGGGCTACACCG
GCTCTCCCGAGGCGCTCGACTCCGCGGTGTCCCCGCGCGGTTTCCGGCTCCTCGCCAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGGCTCCAGAAGCTTCTCGCCGCGAGCGTGGACGACCTCCAGACCGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGTGTCCGCGAGGGGCTGTCCCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436