Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHS57_RS21900 Genome accession   NZ_CP107968
Coordinates   4900261..4901385 (-) Length   374 a.a.
NCBI ID   WP_041986243.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00370     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4895261..4906385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS57_RS21875 (OHS57_21895) cseB 4896006..4896713 (-) 708 WP_041986258.1 two-component system response regulator CseB -
  OHS57_RS21880 (OHS57_21900) - 4896732..4897433 (-) 702 WP_328583086.1 hypothetical protein -
  OHS57_RS21885 (OHS57_21905) - 4897421..4897957 (-) 537 WP_041986253.1 SigE family RNA polymerase sigma factor -
  OHS57_RS21890 (OHS57_21910) - 4898175..4899095 (-) 921 WP_041986249.1 A/G-specific adenine glycosylase -
  OHS57_RS21895 (OHS57_21915) - 4899327..4900190 (+) 864 WP_328585128.1 hypothetical protein -
  OHS57_RS21900 (OHS57_21920) disA 4900261..4901385 (-) 1125 WP_041986243.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHS57_RS21905 (OHS57_21925) radA 4901430..4902839 (-) 1410 WP_041986239.1 DNA repair protein RadA Machinery gene
  OHS57_RS21910 (OHS57_21930) - 4902985..4904883 (+) 1899 WP_328583087.1 hypothetical protein -
  OHS57_RS21915 (OHS57_21935) - 4904890..4905627 (-) 738 WP_241778750.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40207.08 Da        Isoelectric Point: 5.0196

>NTDB_id=650425 OHS57_RS21900 WP_041986243.1 4900261..4901385(-) (disA) [Streptomyces sp. NBC_00370]
MAANDRASAPGKSGAGSGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPESSIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALADLGSPSHAELLELAVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650425 OHS57_RS21900 WP_041986243.1 4900261..4901385(-) (disA) [Streptomyces sp. NBC_00370]
GTGGCAGCCAACGACCGGGCATCAGCACCCGGAAAGTCCGGCGCGGGCTCCGGCAACGAAGCTTTGATGCGCGCCTCGCT
GAGCGCCGTCGCGCCTGGAATGGCGCTGCGCGACGGCCTGGAGCGGATCCTGCGCGGCAACACCGGCGGTCTGATCGTCC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACGGGCGGGTTCGTGCTGGATGTGGAGTTCACCGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTAGACAAGGACATCACGAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
CGAGTCCTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCCGACCGCGTCTCCAAGCAGTGCGGGTTCCCCG
TCGTCTCGGTCTCGCAGTCGATGCGGCTGATCGCCCTGTACGTGAACGGTGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTCTCCCGCGCGAACCAGGCGCTGGCGACGCTGGAGCGCTACAAGCTGCGGCTCGACGAGGTCGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGATCTGGTGACGGTCCGTGACGTCACGGCTGTCGCGCAGCGCCTGGAGATGGTGCGCAGGATCG
CCACGGAGATCGCGGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTACGGGACTACGTCCCGGAGCCGACGGCGAAGCGCTCGCGCACGGTGGACGA
GGCCTTGGCGGACCTGGGCTCGCCCAGCCACGCCGAGCTGCTGGAACTGGCCGTGGTGGCGCGCGCGTTGGGCTACAGCG
GATCACCGGAGACGCTGGACTCTGCGGTGTCGCCGCGCGGTTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCC
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTCGA
CGGGGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCGTCGATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436